RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 DENND2AQ9ULE3 1009 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 OPA1O60313 960 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 FSBPO95073 299 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 LSP1P33241 339 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 PIP4K2AP48426 406 aaPredicted RBP8.37□□□□□ -1.07
CPSF6-202ENST00000435070 CCDC121Q6ZUS5 278 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 MICALCLQ6ZW33 695 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 NAA15Q9BXJ9 866 aaKnown RBP8.37□□□□□ -1.07
CPSF6-202ENST00000435070 SBNO1A3KN83 1393 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 ABCA9Q8IUA7 1624 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 MYL6BP14649 208 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 IDEP14735 1019 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 EIF4A1P60842 406 aaKnown RBP8.37□□□□□ -1.07
CPSF6-202ENST00000435070 DDR1Q08345 913 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 MPRIPQ6WCQ1 1025 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 TRAPPC11Q7Z392 1133 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 RIC3Q7Z5B4 369 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 ZNF473Q8WTR7 871 aaKnown RBP8.37□□□□□ -1.07
CPSF6-202ENST00000435070 IFT81Q8WYA0 676 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 FAM184BQ9ULE4 1060 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 KIF20BQ96Q89 1820 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 PRR36Q9H6K5 1346 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 CD44P16070 742 aaKnown RBP8.37□□□□□ -1.07
CPSF6-202ENST00000435070 CYP27A1Q02318 531 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 TRIM29Q14134 588 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 PTPAQ15257 358 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 TNNI3KQ59H18 835 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 SPDL1Q96EA4 605 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 ADD3Q9UEY8 706 aaKnown RBP8.37□□□□□ -1.07
CPSF6-202ENST00000435070 FPGT-TNNI3KV9GXZ4 949 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 ESYT3A0FGR9 886 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 ATP5JP18859 108 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 GUCY2FP51841 1108 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 CCT8L2Q96SF2 557 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 ABHD10Q9NUJ1 306 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 RIPOR2Q9Y4F9 1068 aa8.37□□□□□ -1.07
CPSF6-202ENST00000435070 NAP1L1P55209 391 aaKnown RBP8.36□□□□□ -1.07
CPSF6-202ENST00000435070 TBC1D8BQ0IIM8 1120 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 SPRED3Q2MJR0 410 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 CYP26C1Q6V0L0 522 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 SMCR8Q8TEV9 937 aaPredicted RBP8.36□□□□□ -1.07
CPSF6-202ENST00000435070 SH3GL2Q99962 352 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 TPX2Q9ULW0 747 aaKnown RBP8.36□□□□□ -1.07
CPSF6-202ENST00000435070 SYNRGQ9UMZ2 1314 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
CPSF6-202ENST00000435070 ACCSLQ4AC99 568 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 ZBTB10Q96DT7 871 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 A1CFQ9NQ94 594 aaKnown RBP8.36□□□□□ -1.07
CPSF6-202ENST00000435070 GOLGA8KD6RF30 607 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 NDUFA10O95299 355 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 PARP9Q8IXQ6 854 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 KCNJ14Q9UNX9 436 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 REXO2Q9Y3B8 237 aaKnown RBP8.36□□□□□ -1.07
CPSF6-202ENST00000435070 BTBD18B2RXH4 712 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 AP1G2O75843 785 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 UPP2O95045 317 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 MYBL1P10243 752 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 SMTNP53814 917 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 CYB5D1Q6P9G0 228 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 KSR2Q6VAB6 950 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 HOMEZQ8IX15 550 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 RBM33Q96EV2 1170 aaKnown RBP8.36□□□□□ -1.07
CPSF6-202ENST00000435070 LACRTQ9GZZ8 138 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 HPS5Q9UPZ3 1129 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 CTNND2Q9UQB3 1225 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 ZMYM6O95789 1325 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 NEXMIFQ5QGS0 1516 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 BTBD11A6QL63 1104 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 PLCD1P51178 756 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 ARMC3Q5W041 872 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 KBTBD3Q8NAB2 608 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 ZIM3Q96PE6 472 aa8.36□□□□□ -1.07
CPSF6-202ENST00000435070 ZBTB12Q9Y330 459 aaPredicted RBP8.36□□□□□ -1.07
CPSF6-202ENST00000435070 SNX1Q13596 522 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 MICAL1Q8TDZ2 1067 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 VCPKMTQ9H867 229 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 DBF4Q9UBU7 674 aaPredicted RBP8.35□□□□□ -1.07
CPSF6-202ENST00000435070 RNASE9P60153 205 aaKnown RBP8.35□□□□□ -1.07
CPSF6-202ENST00000435070 CKAP4Q07065 602 aaKnown RBP8.35□□□□□ -1.07
CPSF6-202ENST00000435070 MYO1EQ12965 1108 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 MORC3Q14149 939 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 CRYMQ14894 314 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 SPATA1Q5VX52 437 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 FAM228AQ86W67 206 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 CFAP58Q5T655 872 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 NFXL1Q6ZNB6 911 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 MAATS1Q7Z4T9 603 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 UBXN1Q04323 297 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 NEXNQ0ZGT2 675 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 APTXQ7Z2E3 356 aaKnown RBP8.35□□□□□ -1.07
CPSF6-202ENST00000435070 NLRP14Q86W24 1093 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 PARD3BQ8TEW8 1205 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 MTMR7Q9Y216 660 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 PPP6R2O75170 966 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 MYCBPAPQ8TBZ2 947 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 XAGE2Q96GT9 111 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 SLC26A6Q9BXS9 759 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 BLZF1Q9H2G9 400 aa8.35□□□□□ -1.07
CPSF6-202ENST00000435070 ZSCAN5CA6NGD5 496 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms