RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TSPAN15O95858 294 aa7.25□□□□□ -1.25
PTPN4-205ENST00000433888 ST13P50502 369 aaKnown RBP7.25□□□□□ -1.25
PTPN4-205ENST00000433888 TAF1CQ15572 869 aaPredicted RBP7.25□□□□□ -1.25
PTPN4-205ENST00000433888 GAB4Q2WGN9 574 aa7.25□□□□□ -1.25
PTPN4-205ENST00000433888 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
PTPN4-205ENST00000433888 C1QL4Q86Z23 238 aa7.25□□□□□ -1.25
PTPN4-205ENST00000433888 CORINQ9Y5Q5 1042 aa7.25□□□□□ -1.25
PTPN4-205ENST00000433888 UPK3BL1B0FP48 263 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 UPK3BL2E5RIL1 263 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 CILPO75339 1184 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 RLBP1P12271 317 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 CFPP27918 469 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 ETV3P41162 512 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 ERVFC1P60507 584 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 PDE4BQ07343 736 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 DNAJC14Q6Y2X3 702 aaPredicted RBP7.24□□□□□ -1.25
PTPN4-205ENST00000433888 SYDE1Q6ZW31 735 aaPredicted RBP7.24□□□□□ -1.25
PTPN4-205ENST00000433888 SND1Q7KZF4 910 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTPN4-205ENST00000433888 TTC6Q86TZ1 520 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 CCDC84Q86UT8 332 aaPredicted RBP7.24□□□□□ -1.25
PTPN4-205ENST00000433888 JARID2Q92833 1246 aaPredicted RBP7.24□□□□□ -1.25
PTPN4-205ENST00000433888 GPR62Q9BZJ7 368 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 SP110Q9HB58 689 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 SLAMF8Q9P0V8 285 aa7.24□□□□□ -1.25
PTPN4-205ENST00000433888 FAM221AA4D161 298 aa7.23□□□□□ -1.25
PTPN4-205ENST00000433888 RAP1GAPP47736 663 aa7.23□□□□□ -1.25
PTPN4-205ENST00000433888 TMEM201Q5SNT2 666 aa7.23□□□□□ -1.25
PTPN4-205ENST00000433888 MPZL3Q6UWV2 235 aa7.23□□□□□ -1.25
PTPN4-205ENST00000433888 ADAMTS10Q9H324 1103 aa7.23□□□□□ -1.25
PTPN4-205ENST00000433888 TMEM59LQ9UK28 342 aa7.23□□□□□ -1.25
PTPN4-205ENST00000433888 HPXP02790 462 aa7.22□□□□□ -1.25
PTPN4-205ENST00000433888 C1QTNF9P0C862 333 aa7.22□□□□□ -1.25
PTPN4-205ENST00000433888 TPP2P29144 1249 aaPredicted RBP7.22□□□□□ -1.25
PTPN4-205ENST00000433888 BNC2Q6ZN30 1099 aaPredicted RBP7.22□□□□□ -1.25
PTPN4-205ENST00000433888 TMC4Q7Z404 712 aa7.22□□□□□ -1.25
PTPN4-205ENST00000433888 PPP1R16BQ96T49 567 aa7.22□□□□□ -1.25
PTPN4-205ENST00000433888 KRTAP4-9Q9BYQ8 210 aa7.22□□□□□ -1.25
PTPN4-205ENST00000433888 PRR36Q9H6K5 1346 aa7.22□□□□□ -1.25
PTPN4-205ENST00000433888 FBXO33Q7Z6M2 555 aa7.21□□□□□ -1.26
PTPN4-205ENST00000433888 CREG2Q8IUH2 290 aa7.21□□□□□ -1.26
PTPN4-205ENST00000433888 DTWD2Q8NBA8 298 aa7.21□□□□□ -1.26
PTPN4-205ENST00000433888 FBXO15Q8NCQ5 510 aaPredicted RBP7.21□□□□□ -1.26
PTPN4-205ENST00000433888 ABHD4Q8TB40 342 aa7.21□□□□□ -1.26
PTPN4-205ENST00000433888 KCNK12Q9HB15 430 aa7.21□□□□□ -1.26
PTPN4-205ENST00000433888 PLCG1P19174 1290 aa7.2□□□□□ -1.26
PTPN4-205ENST00000433888 LMNB2Q03252 620 aa7.2□□□□□ -1.26
PTPN4-205ENST00000433888 PSMD2Q13200 908 aa7.2□□□□□ -1.26
PTPN4-205ENST00000433888 CAMK2GQ13555 558 aaPredicted RBP7.2□□□□□ -1.26
PTPN4-205ENST00000433888 CYB5D2Q8WUJ1 264 aa7.2□□□□□ -1.26
PTPN4-205ENST00000433888 GATAD2BQ8WXI9 593 aa7.2□□□□□ -1.26
PTPN4-205ENST00000433888 FAM161BQ96MY7 647 aa7.2□□□□□ -1.26
PTPN4-205ENST00000433888 NSUN3Q9H649 340 aaKnown RBP7.2□□□□□ -1.26
PTPN4-205ENST00000433888 LRRN2O75325 713 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 F13A1P00488 732 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 PF4P02776 101 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 HK2P52789 917 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 LCNL1Q6ZST4 164 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 TSPYL5Q86VY4 417 aaPredicted RBP7.19□□□□□ -1.26
PTPN4-205ENST00000433888 SLFN12Q8IYM2 578 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 FAM13CQ8NE31 585 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 MYLIPQ8WY64 445 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 RHOVQ96L33 236 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 TOX2Q96NM4 488 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 DIRC2Q96SL1 478 aa7.19□□□□□ -1.26
PTPN4-205ENST00000433888 KRTAP9-7A8MTY7 169 aa7.18□□□□□ -1.26
PTPN4-205ENST00000433888 F6X3S4 739 aa7.18□□□□□ -1.26
PTPN4-205ENST00000433888 RAC2P15153 192 aa7.18□□□□□ -1.26
PTPN4-205ENST00000433888 RNF141Q8WVD5 230 aa7.18□□□□□ -1.26
PTPN4-205ENST00000433888 RSRP1Q9BUV0 290 aa7.18□□□□□ -1.26
PTPN4-205ENST00000433888 TRIT1Q9H3H1 467 aaKnown RBP7.18□□□□□ -1.26
PTPN4-205ENST00000433888 POLR3KQ9Y2Y1 108 aaPredicted RBP7.18□□□□□ -1.26
PTPN4-205ENST00000433888 CHURC1-FNTBB4DL54 471 aa7.17□□□□□ -1.26
PTPN4-205ENST00000433888 ZGLP1P0C6A0 271 aa7.17□□□□□ -1.26
PTPN4-205ENST00000433888 YARSP54577 528 aaKnown RBP7.17□□□□□ -1.26
PTPN4-205ENST00000433888 ANKLE2Q86XL3 938 aa7.17□□□□□ -1.26
PTPN4-205ENST00000433888 SIAH1Q8IUQ4 282 aa7.17□□□□□ -1.26
PTPN4-205ENST00000433888 VWCEQ96DN2 955 aa7.17□□□□□ -1.26
PTPN4-205ENST00000433888 DUSP13Q9UII6 198 aa7.17□□□□□ -1.26
PTPN4-205ENST00000433888 DNAJA2O60884 412 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 MED14OSP0DP75 135 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 GARTP22102 1010 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 TRHRP34981 398 aaPredicted RBP7.16□□□□□ -1.26
PTPN4-205ENST00000433888 XPCQ01831 940 aaPredicted RBP7.16□□□□□ -1.26
PTPN4-205ENST00000433888 TAGLNQ01995 201 aaKnown RBP7.16□□□□□ -1.26
PTPN4-205ENST00000433888 EGR3Q06889 387 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 LRRC56Q8IYG6 542 aaPredicted RBP7.16□□□□□ -1.26
PTPN4-205ENST00000433888 PDZD8Q8NEN9 1154 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 BAHD1Q8TBE0 780 aaPredicted RBP7.16□□□□□ -1.26
PTPN4-205ENST00000433888 CRELD1Q96HD1 420 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 TMEM74Q96NL1 305 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 CD320Q9NPF0 282 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 DCP1AQ9NPI6 582 aaPredicted RBP7.16□□□□□ -1.26
PTPN4-205ENST00000433888 GPATCH2Q9NW75 528 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 REV1Q9UBZ9 1251 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 KCNH3Q9ULD8 1083 aa7.16□□□□□ -1.26
PTPN4-205ENST00000433888 RBM47A0AV96 593 aaKnown RBP7.15□□□□□ -1.26
PTPN4-205ENST00000433888 NFIBO00712 420 aa7.15□□□□□ -1.26
PTPN4-205ENST00000433888 RNF32Q9H0A6 362 aa7.15□□□□□ -1.26
PTPN4-205ENST00000433888 EPB41L4BQ9H329 900 aa7.15□□□□□ -1.26
PTPN4-205ENST00000433888 EBF1Q9UH73 591 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms