RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 ZYXQ15942 572 aaKnown RBP22.58■■□□□ 1.21
RPUSD3-207ENST00000433555 PROCA1Q8NCQ7 364 aaPredicted RBP22.58■■□□□ 1.21
RPUSD3-207ENST00000433555 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.58■■□□□ 1.21
RPUSD3-207ENST00000433555 CABP5Q9NP86 173 aa22.58■■□□□ 1.21
RPUSD3-207ENST00000433555 RLFQ13129 1914 aa22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 A0A1W2PRG0 241 aa22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 USP17L10C9JJH3 530 aa22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 FKTNO75072 461 aa22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 PRDM1O75626 825 aa22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 HSPD1P10809 573 aaKnown RBP22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 TMEM179Q6ZVK1 233 aa22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 EMILIN3Q9NT22 766 aa22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 A0A0G2JMZ2 1700 aa22.57■■□□□ 1.2
RPUSD3-207ENST00000433555 TLR2O60603 784 aa22.56■■□□□ 1.2
RPUSD3-207ENST00000433555 CTDSPL2Q05D32 466 aa22.56■■□□□ 1.2
RPUSD3-207ENST00000433555 SIAH1Q8IUQ4 282 aa22.56■■□□□ 1.2
RPUSD3-207ENST00000433555 TNS4Q8IZW8 715 aa22.56■■□□□ 1.2
RPUSD3-207ENST00000433555 PARK7Q99497 189 aaKnown RBP22.56■■□□□ 1.2
RPUSD3-207ENST00000433555 CPA4Q9UI42 421 aa22.56■■□□□ 1.2
RPUSD3-207ENST00000433555 SLC45A1Q9Y2W3 748 aa22.56■■□□□ 1.2
RPUSD3-207ENST00000433555 ZMYM6O95789 1325 aa22.56■■□□□ 1.2
RPUSD3-207ENST00000433555 HIP1O00291 1037 aa22.55■■□□□ 1.2
RPUSD3-207ENST00000433555 ALX1Q15699 326 aa22.55■■□□□ 1.2
RPUSD3-207ENST00000433555 CD99L2Q8TCZ2 262 aa22.55■■□□□ 1.2
RPUSD3-207ENST00000433555 CCDC17Q96LX7 622 aa22.55■■□□□ 1.2
RPUSD3-207ENST00000433555 FEZ1Q99689 392 aa22.55■■□□□ 1.2
RPUSD3-207ENST00000433555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.55■■□□□ 1.2
RPUSD3-207ENST00000433555 C19orf81C9J6K1 198 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 FGAP02671 866 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 CHMLP26374 656 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 ICA1Q05084 483 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 USP17L2Q6R6M4 530 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 C17orf99Q6UX52 265 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 C12orf42Q96LP6 360 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 NBPF3Q9H094 633 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 KIAA1683Q9H0B3 1180 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 INCENPQ9NQS7 918 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 TMOD4Q9NZQ9 345 aa22.54■■□□□ 1.2
RPUSD3-207ENST00000433555 PLIN4Q96Q06 1357 aa22.53■■□□□ 1.2
RPUSD3-207ENST00000433555 KIAA1755Q5JYT7 1200 aa22.53■■□□□ 1.2
RPUSD3-207ENST00000433555 ARHGAP39Q9C0H5 1083 aa22.53■■□□□ 1.2
RPUSD3-207ENST00000433555 IGKV6D-41A0A0C4DH26 115 aa22.52■■□□□ 1.2
RPUSD3-207ENST00000433555 BCRP11274 1271 aa22.52■■□□□ 1.2
RPUSD3-207ENST00000433555 SP3Q02447 781 aa22.52■■□□□ 1.2
RPUSD3-207ENST00000433555 CTU1Q7Z7A3 348 aaKnown RBP22.52■■□□□ 1.2
RPUSD3-207ENST00000433555 MCOLN1Q9GZU1 580 aa22.52■■□□□ 1.2
RPUSD3-207ENST00000433555 MKNK2Q9HBH9 465 aa22.52■■□□□ 1.2
RPUSD3-207ENST00000433555 ANAPC4Q9UJX5 808 aa22.52■■□□□ 1.2
RPUSD3-207ENST00000433555 RAD50Q92878 1312 aa22.52■■□□□ 1.2
RPUSD3-207ENST00000433555 VCAM1P19320 739 aa22.51■■□□□ 1.19
RPUSD3-207ENST00000433555 CTGFP29279 349 aa22.51■■□□□ 1.19
RPUSD3-207ENST00000433555 HAND2P61296 217 aa22.51■■□□□ 1.19
RPUSD3-207ENST00000433555 TBC1D10CQ8IV04 446 aa22.51■■□□□ 1.19
RPUSD3-207ENST00000433555 ASCC2Q9H1I8 757 aaPredicted RBP22.51■■□□□ 1.19
RPUSD3-207ENST00000433555 ECM2O94769 699 aaPredicted RBP22.5■■□□□ 1.19
RPUSD3-207ENST00000433555 EEF2P13639 858 aaKnown RBP22.5■■□□□ 1.19
RPUSD3-207ENST00000433555 NKX2-3Q8TAU0 364 aa22.5■■□□□ 1.19
RPUSD3-207ENST00000433555 COL11A1P12107 1806 aaPredicted RBP22.5■■□□□ 1.19
RPUSD3-207ENST00000433555 PEX10O60683 326 aa22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 HOXA7P31268 230 aaPredicted RBP22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 MFAP1P55081 439 aaKnown RBP22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 PDE4BQ07343 736 aa22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 FAM47AQ5JRC9 791 aa22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 POTEEQ6S8J3 1075 aa22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 ERO1AQ96HE7 468 aa22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 PNMA3Q9UL41 463 aa22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 TMX2Q9Y320 296 aa22.49■■□□□ 1.19
RPUSD3-207ENST00000433555 PLXNB2O15031 1838 aa22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 USP14P54578 494 aa22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 LACTBP83111 547 aaPredicted RBP22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 BMP2KLQ5H9B9 411 aa22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 OTOP1Q7RTM1 612 aa22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 SMCR8Q8TEV9 937 aaPredicted RBP22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 DSCC1Q9BVC3 393 aa22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 KANSL2Q9H9L4 492 aa22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 ARHGEF10LQ9HCE6 1279 aa22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 PPP4R2Q9NY27 417 aa22.48■■□□□ 1.19
RPUSD3-207ENST00000433555 SLC3A2P08195 630 aaKnown RBP22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 FGRP09769 529 aa22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 OSBPP22059 807 aa22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 ATP2B2Q01814 1243 aa22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 PABPC4Q13310 644 aaKnown RBP eCLIP22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 CEP95Q96GE4 821 aa22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 RPAP3Q9H6T3 665 aaPredicted RBP22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 TRIM17Q9Y577 477 aa22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 NEDD4P46934 1319 aa22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 DOCK3Q8IZD9 2030 aa22.47■■□□□ 1.19
RPUSD3-207ENST00000433555 HTTP42858 3142 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 SGSM2O43147 1006 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 ORC4O43929 436 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 IRX3P78415 501 aaPredicted RBP22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 PTH1RQ03431 593 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 ZNF444Q8N0Y2 327 aaPredicted RBP22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 SPICE1Q8N0Z3 855 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 ANKRD13CQ8N6S4 541 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 NEDD1Q8NHV4 660 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 P2RX7Q99572 595 aaKnown RBP22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 VCPKMTQ9H867 229 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 ZNF287Q9HBT7 754 aa22.46■■□□□ 1.19
RPUSD3-207ENST00000433555 TSPY3P0CV98 308 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 567.2 ms