RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 SHTN1A0MZ66 631 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 MINDY4BA8MYZ0 360 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 PDGFAP04085 211 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 FXR1P51114 621 aaKnown RBP eCLIP7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 MVPQ14764 893 aaKnown RBP7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 AGERQ15109 404 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 KIAA0907Q7Z7F0 614 aaPredicted RBP7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 MORC1Q86VD1 984 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 HHIPL1Q96JK4 782 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 HOMER2Q9NSB8 354 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 CABP1Q9NZU7 370 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 ADAMTSL1Q8N6G6 1762 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 NPHP1O15259 732 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 POU3F3P20264 500 aaPredicted RBP7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 NOS2P35228 1153 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 BRD3Q15059 726 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 LHX8Q68G74 356 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 PAF1Q8N7H5 531 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 C22orf23Q9BZE7 217 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 TAF1DQ9H5J8 278 aaPredicted RBP7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 ARNT2Q9HBZ2 717 aa7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 AVENQ9NQS1 362 aaPredicted RBP7.39□□□□□ -1.23
NIPAL3-205ENST00000432012 GOLGB1Q14789 3259 aaKnown RBP7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 M0R2N6 131 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 USP17L7P0C7H9 530 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 TRAPPC10P48553 1259 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 GDF10P55107 478 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 SEPT6Q14141 434 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 PKN2Q16513 984 aaKnown RBP7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 SDR16C5Q8N3Y7 309 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 TTLL6Q8N841 843 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 RASGRP4Q8TDF6 673 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 GPR152Q8TDT2 470 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 PANK2Q9BZ23 570 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 RAB6BQ9NRW1 208 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 CD163L1Q9NR16 1453 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 LOC102724428A0A0B4J2F2 783 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 BHMG1C9JSJ3 638 aaPredicted RBP7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 ALDH1L1O75891 902 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 FGAP02671 866 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 RFC4P35249 363 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 SIK1P57059 783 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 TAF1CQ15572 869 aaPredicted RBP7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 KSR2Q6VAB6 950 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 LINC00116Q8NCU8 138 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 VPS37AQ8NEZ2 397 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 IP6K1Q92551 441 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 FAM163AQ96GL9 167 aaPredicted RBP7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 ETNK1Q9HBU6 452 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 SAGE1Q9NXZ1 904 aa7.38□□□□□ -1.23
NIPAL3-205ENST00000432012 GYS1P13807 737 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 LIG1P18858 919 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 ZAP70P43403 619 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 TNNT2P45379 298 aaPredicted RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 MRE11P49959 708 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 NFX1Q12986 1120 aaKnown RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 KMT5BQ4FZB7 885 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 ARMC3Q5W041 872 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 AMIGO3Q86WK7 504 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 FTSJ3Q8IY81 847 aaKnown RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 EAF1Q96JC9 268 aaPredicted RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 HS3ST6Q96QI5 342 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 PNNQ9H307 717 aaKnown RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 ITGB4P16144 1822 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 IFRD1O00458 451 aaPredicted RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 TSPAN6O43657 245 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 TTF1Q15361 905 aaPredicted RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 SUGP1Q8IWZ8 645 aaKnown RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 DZIP1LQ8IYY4 767 aaKnown RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 CNTROBQ8N137 903 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 CCDC24Q8N4L8 307 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 SMAD5Q99717 465 aaKnown RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 ZHX3Q9H4I2 956 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 TAGLN3Q9UI15 199 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 FOXD3Q9UJU5 478 aaPredicted RBP7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 SPG7Q9UQ90 795 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 DAAM1Q9Y4D1 1078 aa7.37□□□□□ -1.23
NIPAL3-205ENST00000432012 FBXO24O75426 580 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 CDC27P30260 824 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 SLC4A8Q2Y0W8 1093 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 MPRIPQ6WCQ1 1025 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 SLC9A9Q8IVB4 645 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 HSCBQ8IWL3 235 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 ZNF687Q8N1G0 1237 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 CACTIN-AS1Q8N1I8 211 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 HACL1Q9UJ83 578 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 PPP1R12AO14974 1030 aaPredicted RBP7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 CT47B1P0C2W7 299 aaPredicted RBP7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 SRGNP10124 158 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 HDAC1Q13547 482 aaPredicted RBP7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 ALKBH2Q6NS38 261 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 CC2D1AQ6P1N0 951 aaPredicted RBP7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 APPBP2Q92624 585 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 SLC10A4Q96EP9 437 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 CFAP53Q96M91 514 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 UBP1Q9NZI7 540 aa7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 ISY1Q9ULR0 285 aaKnown RBP7.36□□□□□ -1.23
NIPAL3-205ENST00000432012 PPT2Q9UMR5 302 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms