RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 ARMT1Q9H993 441 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 MCM9Q9NXL9 1143 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 LAMA3Q16787 3333 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 BAZ2AQ9UIF9 1905 aaKnown RBP17.3■□□□□ 0.36
SMARCE1-205ENST00000431889 PRKAB2O43741 272 aa17.3■□□□□ 0.36
SMARCE1-205ENST00000431889 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
SMARCE1-205ENST00000431889 EVI5O60447 810 aa17.3■□□□□ 0.36
SMARCE1-205ENST00000431889 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
SMARCE1-205ENST00000431889 CLEC10AQ8IUN9 316 aa17.3■□□□□ 0.36
SMARCE1-205ENST00000431889 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
SMARCE1-205ENST00000431889 CNMDO75829 334 aa17.29■□□□□ 0.36
SMARCE1-205ENST00000431889 SEPT2Q15019 361 aa17.29■□□□□ 0.36
SMARCE1-205ENST00000431889 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
SMARCE1-205ENST00000431889 DYNLL2Q96FJ2 89 aa17.29■□□□□ 0.36
SMARCE1-205ENST00000431889 CRISPLD2Q9H0B8 497 aa17.29■□□□□ 0.36
SMARCE1-205ENST00000431889 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
SMARCE1-205ENST00000431889 HMX1Q9NP08 348 aaPredicted RBP17.29■□□□□ 0.36
SMARCE1-205ENST00000431889 ZBTB40Q9NUA8 1239 aa17.29■□□□□ 0.36
SMARCE1-205ENST00000431889 CYP2D7A0A087X1C5 515 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 TCRBV5S4A2TA0A5A2 114 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 PRKAR2AP13861 404 aaKnown RBP17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 VCAM1P19320 739 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 TTC6Q86TZ1 520 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 C7orf61Q8IZ16 206 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 KIF1BPQ96EK5 621 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 NUDT12Q9BQG2 462 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 STAP2Q9UGK3 403 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 CCND3P30281 292 aaPredicted RBP17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 HSP90AB4PQ58FF6 505 aa17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
SMARCE1-205ENST00000431889 RPTORQ8N122 1335 aa17.27■□□□□ 0.36
SMARCE1-205ENST00000431889 A0A1W2PRG0 241 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 SYN1P17600 705 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 CACNB2Q08289 660 aaPredicted RBP17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 KIAA1755Q5JYT7 1200 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 CRNKL1Q9BZJ0 848 aaKnown RBP17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 EHD4Q9H223 541 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 CABP5Q9NP86 173 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 BTBD7Q9P203 1132 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 NR2E3Q9Y5X4 410 aa17.27■□□□□ 0.35
SMARCE1-205ENST00000431889 MYH8P13535 1937 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 MBD4O95243 580 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 MNX1P50219 401 aaPredicted RBP17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 CATSPERGQ6ZRH7 1159 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 NECAB2Q7Z6G3 386 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 STK11IPQ8N1F8 1099 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 DCP1AQ9NPI6 582 aaPredicted RBP17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 PAG1Q9NWQ8 432 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 FLRT1Q9NZU1 646 aa17.26■□□□□ 0.35
SMARCE1-205ENST00000431889 HMMRO75330 724 aa17.25■□□□□ 0.35
SMARCE1-205ENST00000431889 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
SMARCE1-205ENST00000431889 MAPK4P31152 587 aa17.25■□□□□ 0.35
SMARCE1-205ENST00000431889 GABPAQ06546 454 aa17.25■□□□□ 0.35
SMARCE1-205ENST00000431889 GINM1Q9NU53 330 aa17.25■□□□□ 0.35
SMARCE1-205ENST00000431889 MORN1Q5T089 497 aa17.24■□□□□ 0.35
SMARCE1-205ENST00000431889 TSHZ3Q63HK5 1081 aa17.24■□□□□ 0.35
SMARCE1-205ENST00000431889 SPICE1Q8N0Z3 855 aa17.24■□□□□ 0.35
SMARCE1-205ENST00000431889 C12orf42Q96LP6 360 aa17.24■□□□□ 0.35
SMARCE1-205ENST00000431889 KIAA1683Q9H0B3 1180 aa17.24■□□□□ 0.35
SMARCE1-205ENST00000431889 MS4A1P11836 297 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 AKR1B1P15121 316 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 ADD2P35612 726 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 SOCS4Q8WXH5 440 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 USP6NLQ92738 828 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 MYH7P12883 1935 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 SPDYE16A6NNV3 312 aaPredicted RBP17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 RGS2P41220 211 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 MAP3K21Q5TCX8 1036 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 PRO3102Q9H379 93 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 C11orf49Q9H6J7 331 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 RABGAP1Q9Y3P9 1069 aa17.23■□□□□ 0.35
SMARCE1-205ENST00000431889 SOX1O00570 391 aaPredicted RBP17.22■□□□□ 0.35
SMARCE1-205ENST00000431889 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
SMARCE1-205ENST00000431889 USP14P54578 494 aa17.22■□□□□ 0.35
SMARCE1-205ENST00000431889 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
SMARCE1-205ENST00000431889 NPLOC4Q8TAT6 608 aa17.22■□□□□ 0.35
SMARCE1-205ENST00000431889 NBPF3Q9H094 633 aa17.22■□□□□ 0.35
SMARCE1-205ENST00000431889 FRMPD3Q5JV73 1810 aa17.22■□□□□ 0.35
SMARCE1-205ENST00000431889 PFASO15067 1338 aa17.22■□□□□ 0.35
SMARCE1-205ENST00000431889 IGSF3O75054 1194 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms