RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 PNMA3Q9UL41 463 aa20.72■□□□□ 0.91
CTDSP1-203ENST00000431127 CCDC171Q6TFL3 1326 aa20.72■□□□□ 0.91
CTDSP1-203ENST00000431127 SMIM22K7EJ46 135 aa20.71■□□□□ 0.91
CTDSP1-203ENST00000431127 GUCY1A2P33402 732 aa20.71■□□□□ 0.91
CTDSP1-203ENST00000431127 USP14P54578 494 aa20.71■□□□□ 0.91
CTDSP1-203ENST00000431127 PKN2Q16513 984 aaKnown RBP20.71■□□□□ 0.91
CTDSP1-203ENST00000431127 USP17L2Q6R6M4 530 aa20.71■□□□□ 0.91
CTDSP1-203ENST00000431127 CWC27Q6UX04 472 aaKnown RBP20.71■□□□□ 0.91
CTDSP1-203ENST00000431127 KIAA1683Q9H0B3 1180 aa20.71■□□□□ 0.91
CTDSP1-203ENST00000431127 AKR1B1P15121 316 aa20.7■□□□□ 0.9
CTDSP1-203ENST00000431127 PDE4BQ07343 736 aa20.7■□□□□ 0.9
CTDSP1-203ENST00000431127 ARHGEF6Q15052 776 aa20.7■□□□□ 0.9
CTDSP1-203ENST00000431127 TREML2Q5T2D2 321 aa20.7■□□□□ 0.9
CTDSP1-203ENST00000431127 VPS53Q5VIR6 699 aa20.7■□□□□ 0.9
CTDSP1-203ENST00000431127 ERICH6BQ5W0A0 696 aa20.7■□□□□ 0.9
CTDSP1-203ENST00000431127 PTPRFP10586 1907 aa20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 FOXP2O15409 715 aa20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 HSPD1P10809 573 aaKnown RBP20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 OSBPP22059 807 aa20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 PPARAQ07869 468 aa20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 C17orf99Q6UX52 265 aa20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 ZNF589Q86UQ0 364 aaPredicted RBP20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 SMCR8Q8TEV9 937 aaPredicted RBP20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 C12orf42Q96LP6 360 aa20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
CTDSP1-203ENST00000431127 SLC34A2O95436 690 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 CYP2C8P10632 490 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 RASA1P20936 1047 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 HOXA7P31268 230 aaPredicted RBP20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 ZNF444Q8N0Y2 327 aaPredicted RBP20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 STK11IPQ8N1F8 1099 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 ACER1Q8TDN7 264 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 SH2D4AQ9H788 454 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 ARHGEF10LQ9HCE6 1279 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 EMILIN3Q9NT22 766 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 ZMYM6O95789 1325 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 ADGRA2Q96PE1 1338 aa20.68■□□□□ 0.9
CTDSP1-203ENST00000431127 FGAP02671 866 aa20.67■□□□□ 0.9
CTDSP1-203ENST00000431127 ICA1Q05084 483 aa20.67■□□□□ 0.9
CTDSP1-203ENST00000431127 KIF22Q14807 665 aa20.67■□□□□ 0.9
CTDSP1-203ENST00000431127 RUFY2Q8WXA3 655 aa20.67■□□□□ 0.9
CTDSP1-203ENST00000431127 CPA4Q9UI42 421 aa20.67■□□□□ 0.9
CTDSP1-203ENST00000431127 ANAPC4Q9UJX5 808 aa20.67■□□□□ 0.9
CTDSP1-203ENST00000431127 HPS5Q9UPZ3 1129 aa20.67■□□□□ 0.9
CTDSP1-203ENST00000431127 IRX3P78415 501 aaPredicted RBP20.66■□□□□ 0.9
CTDSP1-203ENST00000431127 ZYXQ15942 572 aaKnown RBP20.66■□□□□ 0.9
CTDSP1-203ENST00000431127 CD99L2Q8TCZ2 262 aa20.66■□□□□ 0.9
CTDSP1-203ENST00000431127 ASCC2Q9H1I8 757 aaPredicted RBP20.66■□□□□ 0.9
CTDSP1-203ENST00000431127 LOC285556D6RIA3 1793 aa20.66■□□□□ 0.9
CTDSP1-203ENST00000431127 RAD50Q92878 1312 aa20.65■□□□□ 0.9
CTDSP1-203ENST00000431127 GCLCP48506 637 aaPredicted RBP20.65■□□□□ 0.9
CTDSP1-203ENST00000431127 SOX10P56693 466 aa20.65■□□□□ 0.9
CTDSP1-203ENST00000431127 LACTBP83111 547 aaPredicted RBP20.65■□□□□ 0.9
CTDSP1-203ENST00000431127 TMX2Q9Y320 296 aa20.65■□□□□ 0.9
CTDSP1-203ENST00000431127 A0A1W2PRG0 241 aa20.64■□□□□ 0.89
CTDSP1-203ENST00000431127 PRDM1O75626 825 aa20.64■□□□□ 0.89
CTDSP1-203ENST00000431127 BCRP11274 1271 aa20.64■□□□□ 0.89
CTDSP1-203ENST00000431127 LPAR1Q92633 364 aa20.64■□□□□ 0.89
CTDSP1-203ENST00000431127 DSCC1Q9BVC3 393 aa20.64■□□□□ 0.89
CTDSP1-203ENST00000431127 EFCC1Q9HA90 598 aa20.64■□□□□ 0.89
CTDSP1-203ENST00000431127 MYH8P13535 1937 aa20.64■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L15C9J2P7 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L13C9JLJ4 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L11C9JVI0 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 GNRH1P01148 92 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 VCAM1P19320 739 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 CHMLP26374 656 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 OTOP1Q7RTM1 612 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 SIAH1Q8IUQ4 282 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 GTF3C2Q8WUA4 911 aaPredicted RBP20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 TRIM17Q9Y577 477 aa20.63■□□□□ 0.89
CTDSP1-203ENST00000431127 TSPY3P0CV98 308 aa20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 TSPY8P0CW00 308 aa20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 PCP11498 1178 aaKnown RBP20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 EEF2P13639 858 aaKnown RBP20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 ATP2B2Q01814 1243 aa20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 CTDSPL2Q05D32 466 aa20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 PPP4R3BQ5MIZ7 849 aa20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 FBXO46Q6PJ61 603 aaPredicted RBP20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 PPP4R2Q9NY27 417 aa20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 NYAP2Q9P242 653 aa20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 CTNNA3Q9UI47 895 aa20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
CTDSP1-203ENST00000431127 FGRP09769 529 aa20.61■□□□□ 0.89
CTDSP1-203ENST00000431127 FAM110CQ1W6H9 321 aa20.61■□□□□ 0.89
CTDSP1-203ENST00000431127 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
CTDSP1-203ENST00000431127 CLEC10AQ8IUN9 316 aa20.61■□□□□ 0.89
CTDSP1-203ENST00000431127 ANKRD13CQ8N6S4 541 aa20.61■□□□□ 0.89
CTDSP1-203ENST00000431127 NEDD1Q8NHV4 660 aa20.61■□□□□ 0.89
CTDSP1-203ENST00000431127 VCPKMTQ9H867 229 aa20.61■□□□□ 0.89
CTDSP1-203ENST00000431127 GOPCQ9HD26 462 aa20.61■□□□□ 0.89
CTDSP1-203ENST00000431127 PLIN4Q96Q06 1357 aa20.6■□□□□ 0.89
CTDSP1-203ENST00000431127 IGKV6D-41A0A0C4DH26 115 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms