RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
HOXC4-202ENST00000430889 GRIN1Q05586 938 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 CCDC144BQ3MJ40 725 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 EARS2Q5JPH6 523 aaKnown RBP16.05■□□□□ 0.16
HOXC4-202ENST00000430889 KRBA2Q6ZNG9 492 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 C17orf53Q8N3J3 647 aaPredicted RBP16.05■□□□□ 0.16
HOXC4-202ENST00000430889 RBM17Q96I25 401 aaKnown RBP16.05■□□□□ 0.16
HOXC4-202ENST00000430889 CRAMP1Q96RY5 1269 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 IL17RBQ9NRM6 502 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 MCM9Q9NXL9 1143 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 KCNH3Q9ULD8 1083 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
HOXC4-202ENST00000430889 V9GY48 417 aaPredicted RBP16.05■□□□□ 0.16
HOXC4-202ENST00000430889 BECN2A8MW95 431 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 BBOX1O75936 387 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 DIXDC1Q155Q3 683 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 PROM2Q8N271 834 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 QTRT2Q9H974 415 aaKnown RBP16.05■□□□□ 0.16
HOXC4-202ENST00000430889 TCP11L1Q9NUJ3 509 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
HOXC4-202ENST00000430889 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
HOXC4-202ENST00000430889 SNED1Q8TER0 1413 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 EP400Q96L91 3159 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 FAM205CA6NFA0 338 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 UFL1O94874 794 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 XBP1P17861 261 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 KRT2P35908 639 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 AKAP17AQ02040 695 aaKnown RBP16.04■□□□□ 0.16
HOXC4-202ENST00000430889 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 FOXP4Q8IVH2 680 aaPredicted RBP16.04■□□□□ 0.16
HOXC4-202ENST00000430889 FAM163AQ96GL9 167 aaPredicted RBP16.04■□□□□ 0.16
HOXC4-202ENST00000430889 HSD3B7Q9H2F3 369 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
HOXC4-202ENST00000430889 GGA1Q9UJY5 639 aa16.04■□□□□ 0.16
HOXC4-202ENST00000430889 COL11A2P13942 1736 aaPredicted RBP16.03■□□□□ 0.16
HOXC4-202ENST00000430889 GPR75-ASB3A0A0A6YYF3 556 aa16.03■□□□□ 0.16
HOXC4-202ENST00000430889 IKBKBO14920 756 aa16.03■□□□□ 0.16
HOXC4-202ENST00000430889 LDHCP07864 332 aa16.03■□□□□ 0.16
HOXC4-202ENST00000430889 CABP5Q9NP86 173 aa16.03■□□□□ 0.16
HOXC4-202ENST00000430889 POLLQ9UGP5 575 aa16.03■□□□□ 0.16
HOXC4-202ENST00000430889 TAOK2Q9UL54 1235 aa16.03■□□□□ 0.16
HOXC4-202ENST00000430889 CEP131Q9UPN4 1083 aa16.03■□□□□ 0.16
HOXC4-202ENST00000430889 R3HCC1Q9Y3T6 440 aaKnown RBP16.03■□□□□ 0.16
HOXC4-202ENST00000430889 GAKO14976 1311 aa16.03■□□□□ 0.16
HOXC4-202ENST00000430889 hCG_1642624A0A1W2PR95 340 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 TSPY2A6NKD2 308 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 BAG3O95817 575 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 USP5P45974 858 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 PNOCQ13519 176 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 PFKFB3Q16875 520 aaPredicted RBP16.02■□□□□ 0.16
HOXC4-202ENST00000430889 NT5DC1Q5TFE4 455 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 KRT27Q7Z3Y8 459 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
HOXC4-202ENST00000430889 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.16
HOXC4-202ENST00000430889 DYNLL2Q96FJ2 89 aa16.02■□□□□ 0.16
HOXC4-202ENST00000430889 FAM205AQ6ZU69 1335 aa16.02■□□□□ 0.15
HOXC4-202ENST00000430889 BIN1O00499 593 aa16.02■□□□□ 0.15
HOXC4-202ENST00000430889 WNT7AO00755 349 aa16.02■□□□□ 0.15
HOXC4-202ENST00000430889 SCG2P13521 617 aa16.02■□□□□ 0.15
HOXC4-202ENST00000430889 TFAP4Q01664 338 aa16.02■□□□□ 0.15
HOXC4-202ENST00000430889 LRMPQ12912 555 aa16.02■□□□□ 0.15
HOXC4-202ENST00000430889 GRM4Q14833 912 aa16.02■□□□□ 0.15
HOXC4-202ENST00000430889 TRIM75PA6NK02 468 aa16.01■□□□□ 0.15
HOXC4-202ENST00000430889 ACTN4O43707 911 aaKnown RBP16.01■□□□□ 0.15
HOXC4-202ENST00000430889 TRIM37O94972 964 aa16.01■□□□□ 0.15
HOXC4-202ENST00000430889 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
HOXC4-202ENST00000430889 RHBDL3P58872 404 aa16.01■□□□□ 0.15
HOXC4-202ENST00000430889 SLC35G1Q2M3R5 365 aa16.01■□□□□ 0.15
HOXC4-202ENST00000430889 CCDC178Q5BJE1 867 aa16.01■□□□□ 0.15
HOXC4-202ENST00000430889 NOM1Q5C9Z4 860 aaKnown RBP16.01■□□□□ 0.15
HOXC4-202ENST00000430889 TMC4Q7Z404 712 aa16.01■□□□□ 0.15
HOXC4-202ENST00000430889 TGFBRAP1Q8WUH2 860 aa16.01■□□□□ 0.15
HOXC4-202ENST00000430889 NOL10Q9BSC4 688 aaKnown RBP16.01■□□□□ 0.15
HOXC4-202ENST00000430889 FOXN1O15353 648 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 BMP15O95972 392 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 VEGFAP15692 232 aaPredicted RBP16■□□□□ 0.15
HOXC4-202ENST00000430889 RASA1P20936 1047 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 BMP6P22004 513 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 BTDP43251 543 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 PLCD1P51178 756 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 SPECC1Q5M775 1068 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 CNNM3Q8NE01 707 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 SPATA20Q8TB22 786 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 FBXW7Q969H0 707 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 CSRNP2Q9H175 543 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 FAM13BQ9NYF5 915 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 PCDHA5Q9Y5H7 936 aa16■□□□□ 0.15
HOXC4-202ENST00000430889 ZNF646O15015 1829 aaPredicted RBP16■□□□□ 0.15
HOXC4-202ENST00000430889 SMTNL1A8MU46 457 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 KIF5BP33176 963 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 NOVP48745 357 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 ZRSR1Q15695 479 aaKnown RBP15.99■□□□□ 0.15
HOXC4-202ENST00000430889 TXNRD1Q16881 649 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 C16orf86Q6ZW13 317 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 DRC7Q8IY82 874 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 PNMA1Q8ND90 353 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms