RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ELNP15502 786 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 FLT3LGP49771 235 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 HERVK_113P62684 666 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 CTR9Q6PD62 1173 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 USP17L2Q6R6M4 530 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 EXOC6Q8TAG9 804 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 C12orf42Q96LP6 360 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 TMOD4Q9NZQ9 345 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 DNAH12Q6ZR08 3092 aa15.08■□□□□ 0
SMPD4-204ENST00000430682 MYH4Q9Y623 1939 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 TNPO2O14787 897 aaKnown RBP15.07■□□□□ 0
SMPD4-204ENST00000430682 GRK4P32298 578 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 GCLCP48506 637 aaPredicted RBP15.07■□□□□ 0
SMPD4-204ENST00000430682 CDK8P49336 464 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 0
SMPD4-204ENST00000430682 HDAC1Q13547 482 aaPredicted RBP15.07■□□□□ 0
SMPD4-204ENST00000430682 Q3C1V9 767 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 ZSCAN25Q6NSZ9 544 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 RAET1EQ8TD07 263 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 KIAA1683Q9H0B3 1180 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 EPB41L4AQ9HCS5 686 aaPredicted RBP15.07■□□□□ 0
SMPD4-204ENST00000430682 GJD2Q9UKL4 321 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 TTC41PQ6P2S7 1318 aa15.07■□□□□ 0
SMPD4-204ENST00000430682 ZNFX1Q9P2E3 1918 aaKnown RBP15.07■□□□□ 0
SMPD4-204ENST00000430682 MPHOSPH10O00566 681 aaKnown RBP15.06■□□□□ 0
SMPD4-204ENST00000430682 CNMDO75829 334 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 IGHDP01880 384 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 MX1P20591 662 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 HOXD10P28358 340 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 IRX3P78415 501 aaPredicted RBP15.06■□□□□ 0
SMPD4-204ENST00000430682 NBPF11Q86T75 865 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 APPBP2Q92624 585 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 SHISA4Q96DD7 197 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 GPATCH3Q96I76 525 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 CABP5Q9NP86 173 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 A0A0G2JMZ2 1700 aa15.06■□□□□ 0
SMPD4-204ENST00000430682 ADCY3O60266 1144 aa15.05■□□□□ -0
SMPD4-204ENST00000430682 VCAM1P19320 739 aa15.05■□□□□ -0
SMPD4-204ENST00000430682 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ -0
SMPD4-204ENST00000430682 C16orf86Q6ZW13 317 aa15.05■□□□□ -0
SMPD4-204ENST00000430682 FEZ1Q99689 392 aa15.05■□□□□ -0
SMPD4-204ENST00000430682 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.05■□□□□ -0
SMPD4-204ENST00000430682 PORCNQ9H237 461 aa15.05■□□□□ -0
SMPD4-204ENST00000430682 FOXP2O15409 715 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 GPAA1O43292 621 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 GLRX3O76003 335 aaKnown RBP15.04■□□□□ -0
SMPD4-204ENST00000430682 CCL5P13501 91 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 STK11IPQ8N1F8 1099 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 PAGR1Q9BTK6 254 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 TMEM106CQ9BVX2 250 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 UNC93B1Q9H1C4 597 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 STAP2Q9UGK3 403 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 SWAP70Q9UH65 585 aa15.04■□□□□ -0
SMPD4-204ENST00000430682 USP17L15C9J2P7 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 USP17L13C9JLJ4 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 USP17L11C9JVI0 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 USP17L18D6R9N7 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 USP17L22D6RA61 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 USP17L17D6RBQ6 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 USP17L19D6RCP7 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 USP17L20D6RJB6 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 PDE1AP54750 535 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 ERVK-9P63128 1117 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 ERVK-24P63145 666 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 USP17L24Q0WX57 530 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 TRIM32Q13049 653 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 IRF5Q13568 498 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 SBK1Q52WX2 424 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 ZMYM1Q5SVZ6 1142 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 TMEM179Q6ZVK1 233 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 SMC5Q8IY18 1101 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 GCC1Q96CN9 775 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 RPAP3Q9H6T3 665 aaPredicted RBP15.03■□□□□ -0
SMPD4-204ENST00000430682 BTBD7Q9P203 1132 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 ALPK3Q96L96 1907 aa15.03■□□□□ -0
SMPD4-204ENST00000430682 SPDYE16A6NNV3 312 aaPredicted RBP15.02■□□□□ -0
SMPD4-204ENST00000430682 ERC2O15083 957 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 INHAP05111 366 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 ZFYP08048 801 aaPredicted RBP15.02■□□□□ -0
SMPD4-204ENST00000430682 RASA1P20936 1047 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 USP14P54578 494 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 CCDC129Q6ZRS4 1044 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 SLAIN1Q8ND83 568 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 GPRC5AQ8NFJ5 357 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 COA7Q96BR5 231 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 FSD1Q9BTV5 496 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 LNPKQ9C0E8 428 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
SMPD4-204ENST00000430682 SUPT16HQ9Y5B9 1047 aaKnown RBP15.02■□□□□ -0
SMPD4-204ENST00000430682 MINDY4BA8MYZ0 360 aa15.01□□□□□ -0.01
SMPD4-204ENST00000430682 B4GALNT3Q6L9W6 998 aa15.01□□□□□ -0.01
SMPD4-204ENST00000430682 IFNL3Q8IZI9 196 aa15.01□□□□□ -0.01
SMPD4-204ENST00000430682 PXYLP1Q8TE99 480 aa15.01□□□□□ -0.01
SMPD4-204ENST00000430682 USP6NLQ92738 828 aa15.01□□□□□ -0.01
SMPD4-204ENST00000430682 ARPP21Q9UBL0 812 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-204ENST00000430682 BIN2Q9UBW5 565 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-204ENST00000430682 TMX2Q9Y320 296 aa15.01□□□□□ -0.01
SMPD4-204ENST00000430682 RANBP2P49792 3224 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms