RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 CNMDO75829 334 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 CCND3P30281 292 aaPredicted RBP18.31■□□□□ 0.52
TOP3B-204ENST00000430142 BMP8BP34820 402 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 MAP3K12Q12852 859 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 CERKLQ49MI3 558 aaPredicted RBP18.31■□□□□ 0.52
TOP3B-204ENST00000430142 CEP85Q6P2H3 762 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 ACER1Q8TDN7 264 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 EHD4Q9H223 541 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 EXOC6BQ9Y2D4 811 aa18.31■□□□□ 0.52
TOP3B-204ENST00000430142 PFASO15067 1338 aa18.3■□□□□ 0.52
TOP3B-204ENST00000430142 DDX60LQ5H9U9 1706 aaKnown RBP18.3■□□□□ 0.52
TOP3B-204ENST00000430142 PLCD1P51178 756 aa18.3■□□□□ 0.52
TOP3B-204ENST00000430142 ABCB5Q2M3G0 1257 aa18.3■□□□□ 0.52
TOP3B-204ENST00000430142 LHX8Q68G74 356 aa18.3■□□□□ 0.52
TOP3B-204ENST00000430142 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
TOP3B-204ENST00000430142 AACSQ86V21 672 aa18.3■□□□□ 0.52
TOP3B-204ENST00000430142 CWC22Q9HCG8 908 aaKnown RBP18.3■□□□□ 0.52
TOP3B-204ENST00000430142 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
TOP3B-204ENST00000430142 MYH1P12882 1939 aa18.29■□□□□ 0.52
TOP3B-204ENST00000430142 USP14P54578 494 aa18.29■□□□□ 0.52
TOP3B-204ENST00000430142 MAP2K5Q13163 448 aa18.29■□□□□ 0.52
TOP3B-204ENST00000430142 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
TOP3B-204ENST00000430142 APBA2Q99767 749 aa18.29■□□□□ 0.52
TOP3B-204ENST00000430142 RIOK1Q9BRS2 568 aaKnown RBP18.29■□□□□ 0.52
TOP3B-204ENST00000430142 KIAA1683Q9H0B3 1180 aa18.29■□□□□ 0.52
TOP3B-204ENST00000430142 LAMA3Q16787 3333 aa18.28■□□□□ 0.52
TOP3B-204ENST00000430142 COL6A1P12109 1028 aa18.28■□□□□ 0.52
TOP3B-204ENST00000430142 VCAM1P19320 739 aa18.28■□□□□ 0.52
TOP3B-204ENST00000430142 SHMT1P34896 483 aa18.28■□□□□ 0.52
TOP3B-204ENST00000430142 MAGEA10P43363 369 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-204ENST00000430142 WDR78Q5VTH9 848 aa18.28■□□□□ 0.52
TOP3B-204ENST00000430142 ERC1Q8IUD2 1116 aa18.28■□□□□ 0.52
TOP3B-204ENST00000430142 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
TOP3B-204ENST00000430142 MAGEB6P1A0A0J9YX57 407 aa18.27■□□□□ 0.52
TOP3B-204ENST00000430142 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
TOP3B-204ENST00000430142 GUCY1A2P33402 732 aa18.27■□□□□ 0.52
TOP3B-204ENST00000430142 CCNA1P78396 465 aa18.27■□□□□ 0.52
TOP3B-204ENST00000430142 TMED8Q6PL24 325 aaPredicted RBP18.27■□□□□ 0.52
TOP3B-204ENST00000430142 PANK1Q8TE04 598 aa18.27■□□□□ 0.52
TOP3B-204ENST00000430142 IL1RAPL2Q9NP60 686 aa18.27■□□□□ 0.52
TOP3B-204ENST00000430142 FLRT1Q9NZU1 646 aa18.27■□□□□ 0.52
TOP3B-204ENST00000430142 BTBD7Q9P203 1132 aa18.27■□□□□ 0.52
TOP3B-204ENST00000430142 GLRX3O76003 335 aaKnown RBP18.26■□□□□ 0.51
TOP3B-204ENST00000430142 PTPREP23469 700 aa18.26■□□□□ 0.51
TOP3B-204ENST00000430142 EVX2Q03828 476 aa18.26■□□□□ 0.51
TOP3B-204ENST00000430142 SEPT2Q15019 361 aa18.26■□□□□ 0.51
TOP3B-204ENST00000430142 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
TOP3B-204ENST00000430142 SLC15A5A6NIM6 579 aa18.25■□□□□ 0.51
TOP3B-204ENST00000430142 GABPAQ06546 454 aa18.25■□□□□ 0.51
TOP3B-204ENST00000430142 LRRC26Q2I0M4 334 aa18.25■□□□□ 0.51
TOP3B-204ENST00000430142 SLC9C2Q5TAH2 1124 aa18.25■□□□□ 0.51
TOP3B-204ENST00000430142 MFSD14CQ5VZR4 134 aa18.25■□□□□ 0.51
TOP3B-204ENST00000430142 LBX2Q6XYB7 198 aa18.25■□□□□ 0.51
TOP3B-204ENST00000430142 SLC17A8Q8NDX2 589 aa18.25■□□□□ 0.51
TOP3B-204ENST00000430142 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
TOP3B-204ENST00000430142 SPDYE16A6NNV3 312 aaPredicted RBP18.24■□□□□ 0.51
TOP3B-204ENST00000430142 PDE6AP16499 860 aa18.24■□□□□ 0.51
TOP3B-204ENST00000430142 TTF1Q15361 905 aaPredicted RBP18.24■□□□□ 0.51
TOP3B-204ENST00000430142 NPLOC4Q8TAT6 608 aa18.24■□□□□ 0.51
TOP3B-204ENST00000430142 CRNKL1Q9BZJ0 848 aaKnown RBP18.24■□□□□ 0.51
TOP3B-204ENST00000430142 UBE2OQ9C0C9 1292 aaKnown RBP18.24■□□□□ 0.51
TOP3B-204ENST00000430142 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
TOP3B-204ENST00000430142 A0A1W2PRG0 241 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 APBB1O00213 710 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 MPHOSPH10O00566 681 aaKnown RBP18.23■□□□□ 0.51
TOP3B-204ENST00000430142 ATP2B2Q01814 1243 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 GRB14Q14449 540 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 LRIT3Q3SXY7 679 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 HSP90AB4PQ58FF6 505 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 TDHQ8IZJ6 230 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 IVNS1ABPQ9Y6Y0 642 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 ZNF532Q9HCE3 1301 aa18.23■□□□□ 0.51
TOP3B-204ENST00000430142 GOLIM4O00461 696 aa18.22■□□□□ 0.51
TOP3B-204ENST00000430142 HOXC6P09630 235 aa18.22■□□□□ 0.51
TOP3B-204ENST00000430142 CYP2D6P10635 497 aa18.22■□□□□ 0.51
TOP3B-204ENST00000430142 CNGA1P29973 690 aa18.22■□□□□ 0.51
TOP3B-204ENST00000430142 CYP2C19P33261 490 aa18.22■□□□□ 0.51
TOP3B-204ENST00000430142 GPR153Q6NV75 609 aa18.22■□□□□ 0.51
TOP3B-204ENST00000430142 SDR42E1Q8WUS8 393 aa18.22■□□□□ 0.51
TOP3B-204ENST00000430142 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
TOP3B-204ENST00000430142 SENP6Q9GZR1 1112 aaPredicted RBP18.22■□□□□ 0.51
TOP3B-204ENST00000430142 BCL11AQ9H165 835 aa18.22■□□□□ 0.51
TOP3B-204ENST00000430142 TCRBV5S4A2TA0A5A2 114 aa18.21■□□□□ 0.51
TOP3B-204ENST00000430142 COG2Q14746 738 aa18.21■□□□□ 0.51
TOP3B-204ENST00000430142 Q7L0L9 218 aa18.21■□□□□ 0.51
TOP3B-204ENST00000430142 CLASRPQ8N2M8 674 aaKnown RBP18.21■□□□□ 0.51
TOP3B-204ENST00000430142 LCORLQ8N3X6 602 aa18.21■□□□□ 0.51
TOP3B-204ENST00000430142 DEFB123Q8N688 67 aa18.21■□□□□ 0.51
TOP3B-204ENST00000430142 TRPV1Q8NER1 839 aa18.21■□□□□ 0.51
TOP3B-204ENST00000430142 DCP1AQ9NPI6 582 aaPredicted RBP18.21■□□□□ 0.51
TOP3B-204ENST00000430142 DDX20Q9UHI6 824 aaKnown RBP18.21■□□□□ 0.51
TOP3B-204ENST00000430142 MDM2Q00987 491 aaPredicted RBP18.2■□□□□ 0.5
TOP3B-204ENST00000430142 KIAA1755Q5JYT7 1200 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms