RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TUBE1Q9UJT0 475 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 TAOK2Q9UL54 1235 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 CLIC4Q9Y696 253 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 FOXP2O15409 715 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 ADORA1P30542 326 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 SYKP43405 635 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 ANTXR2P58335 489 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 DMTNQ08495 405 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 GNL2Q13823 731 aaKnown RBP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 CT47A1Q5JQC4 288 aaPredicted RBP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 AXDND1Q5T1B0 1012 aaPredicted RBP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 LDHAL6AQ6ZMR3 332 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 CHST3Q7LGC8 479 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 FILIP1Q7Z7B0 1213 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 FCHSD1Q86WN1 690 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 TMTC2Q8N394 836 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 ZNF397Q8NF99 534 aaPredicted RBP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 PUS7LQ9H0K6 701 aaKnown RBP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 DACH1Q9UI36 760 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 HPSEQ9Y251 543 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 MROH5Q6ZUA9 1318 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 NID2Q14112 1375 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 ERVV-1B6SEH8 477 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 PDE8AO60658 829 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 SMC2O95347 1197 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 SLU7O95391 586 aaKnown RBP10□□□□□ -0.81
GABPB1-205ENST00000429662 POLR3DP05423 398 aaPredicted RBP10□□□□□ -0.81
GABPB1-205ENST00000429662 PFKFB1P16118 471 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 GNAT2P19087 354 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 U2AF2P26368 475 aaKnown RBP eCLIP10□□□□□ -0.81
GABPB1-205ENST00000429662 ARID4AP29374 1257 aaPredicted RBP10□□□□□ -0.81
GABPB1-205ENST00000429662 IARSP41252 1262 aaKnown RBP10□□□□□ -0.81
GABPB1-205ENST00000429662 HAND2P61296 217 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 PPP2R5BQ15173 497 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 SAFBQ15424 915 aaKnown RBP eCLIP10□□□□□ -0.81
GABPB1-205ENST00000429662 MAP1SQ66K74 1059 aaPredicted RBP10□□□□□ -0.81
GABPB1-205ENST00000429662 C2CD5Q86YS7 1000 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 CCDC34Q96HJ3 373 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 CAPNS2Q96L46 248 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 SRRTQ9BXP5 876 aaKnown RBP10□□□□□ -0.81
GABPB1-205ENST00000429662 KRT23Q9C075 422 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 CNNM1Q9NRU3 951 aa10□□□□□ -0.81
GABPB1-205ENST00000429662 MORC2Q9Y6X9 1032 aaPredicted RBP10□□□□□ -0.81
GABPB1-205ENST00000429662 CCDC196A0A1B0GTZ2 297 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 C2orf72A6NCS6 295 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 GOLGA6L9A6NEM1 432 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 PATL2C9JE40 543 aaKnown RBP9.99□□□□□ -0.81
GABPB1-205ENST00000429662 ZBTB43O43298 467 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 C21orf2O43822 256 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
GABPB1-205ENST00000429662 KIF20AO95235 890 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 PDE8BO95263 885 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 TPM1P09493 284 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 ITGA6P23229 1130 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 CTSWP56202 376 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 FANCCQ00597 558 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 MYL5Q02045 173 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 GABPB1Q06547 395 aaPredicted RBP9.99□□□□□ -0.81
GABPB1-205ENST00000429662 SSRP1Q08945 709 aaKnown RBP9.99□□□□□ -0.81
GABPB1-205ENST00000429662 DPCR1Q3MIW9 517 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 SLC9C2Q5TAH2 1124 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 CST9Q5W186 159 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 RESP18Q5W5W9 173 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 CCDC102BQ68D86 513 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 KRT40Q6A162 431 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 CYP4F22Q6NT55 531 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 KANK3Q6NY19 840 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 TMC6Q7Z403 805 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 NBPF11Q86T75 865 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 NLRP10Q86W26 655 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 CREBRFQ8IUR6 639 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 C7orf43Q8WVR3 580 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 LPIN2Q92539 896 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 TSC1Q92574 1164 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 XPO4Q9C0E2 1151 aaKnown RBP9.99□□□□□ -0.81
GABPB1-205ENST00000429662 IFNKQ9P0W0 207 aa9.99□□□□□ -0.81
GABPB1-205ENST00000429662 RIC1Q4ADV7 1423 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 CUL9Q8IWT3 2517 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 IQCA1LA6NCM1 817 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 ZSCAN12O43309 604 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 AOC2O75106 756 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 SERPINB2P05120 415 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 MCAMP43121 646 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 MAP3K12Q12852 859 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 NCAPHQ15003 741 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 SART3Q15020 963 aaKnown RBP9.98□□□□□ -0.81
GABPB1-205ENST00000429662 PTPAQ15257 358 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 PUM3Q15397 648 aaKnown RBP9.98□□□□□ -0.81
GABPB1-205ENST00000429662 TMED8Q6PL24 325 aaPredicted RBP9.98□□□□□ -0.81
GABPB1-205ENST00000429662 APOA5Q6Q788 366 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 NFXL1Q6ZNB6 911 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 VPS37DQ86XT2 251 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 TRIML1Q8N9V2 468 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 ZNF592Q92610 1267 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 FAM89AQ96GI7 184 aa9.98□□□□□ -0.81
GABPB1-205ENST00000429662 NACAP1Q9BZK3 213 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms