RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 H2AFXP16104 143 aaPredicted RBP15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 XBP1P17861 261 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 GYG1P46976 350 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 PLCD1P51178 756 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 SIK1P57059 783 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 ITPK1Q13572 414 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 NUTM2AQ8IVF1 878 aaPredicted RBP15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 TC2NQ8N9U0 490 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 ZSCAN10Q96SZ4 725 aaPredicted RBP15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 BAG1Q99933 345 aaPredicted RBP15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 PHF20Q9BVI0 1012 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 SAMSN1Q9NSI8 373 aaKnown RBP15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 FAM53CQ9NYF3 392 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 A0A1B0GUL6 1792 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 A0A087X0B3 334 aa15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 EARS2Q5JPH6 523 aaKnown RBP15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 CDC5LQ99459 802 aaKnown RBP15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 PRPF3O43395 683 aaKnown RBP15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 ERCC5P28715 1186 aaPredicted RBP15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 KRT2P35908 639 aa15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 KRT222Q8N1A0 295 aa15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 DHX58Q96C10 678 aa15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 ZNF446Q9NWS9 450 aa15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 KCNG1Q9UIX4 513 aa15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 ZHX1Q9UKY1 873 aaPredicted RBP15.19■□□□□ 0.02
SNRNP200-202ENST00000429650 CYP2D7A0A087X1C5 515 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 hCG_1642624A0A1W2PR95 340 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 STX10O60499 249 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 PRDM1O75626 825 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 IFIT1BQ5T764 474 aaKnown RBP15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 EPSTI1Q96J88 318 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 GNL3LQ9NVN8 582 aaKnown RBP15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 WTIPA6NIX2 430 aaPredicted RBP15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 PLEKHA8P1O95397 391 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 ADKP55263 362 aaKnown RBP15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 DYNLL1P63167 89 aaKnown RBP15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 GABPB1Q06547 395 aaPredicted RBP15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 NR1I3Q14994 352 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 TMED8Q6PL24 325 aaPredicted RBP15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 PARP3Q9Y6F1 533 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 V9GY48 417 aaPredicted RBP15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 DLEC1Q9Y238 1755 aa15.18■□□□□ 0.02
SNRNP200-202ENST00000429650 URI1O94763 535 aaPredicted RBP15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 BRIP1Q9BX63 1249 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 SRRTQ9BXP5 876 aaKnown RBP15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 RBM28Q9NW13 759 aaKnown RBP15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 TAF1P21675 1872 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 WNT7AO00755 349 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 SLFN14P0C7P3 912 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 TROAPQ12815 778 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 UBE4AQ14139 1066 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 ARHGAP29Q52LW3 1261 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 SH3RF1Q7Z6J0 888 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 CCDC34Q96HJ3 373 aa15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 COL22A1Q8NFW1 1626 aaPredicted RBP15.17■□□□□ 0.02
SNRNP200-202ENST00000429650 A0A1B0GTH6 734 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 GOLGA6L9A6NEM1 432 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 FGRP09769 529 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 AFMP43652 599 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 CT47A1Q5JQC4 288 aaPredicted RBP15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 TOGARAM2Q6ZUX3 1019 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 IQCA1Q86XH1 822 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 ANKRD18AQ8IVF6 992 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 ZNF384Q8TF68 577 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 SYMPKQ92797 1274 aaKnown RBP15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 PAGE5Q96GU1 130 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 SCN7AQ01118 1682 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 NPY5RQ15761 445 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 APTXQ7Z2E3 356 aaKnown RBP15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 FERMT2Q96AC1 680 aa15.16■□□□□ 0.02
SNRNP200-202ENST00000429650 TADA3O75528 432 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 BMP15O95972 392 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CALM1P0DP23 149 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CALM2P0DP24 149 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CALM3P0DP25 149 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CLCN6P51797 869 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CUL4BQ13620 913 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 DDB1Q16531 1140 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 FAM177A1Q8N128 213 aaPredicted RBP15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 MNS1Q8NEH6 495 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 UBXN4Q92575 508 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CDCA7Q9BWT1 371 aaPredicted RBP15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 KIF20AO95235 890 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 PCP11498 1178 aaKnown RBP15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CASP1P29466 404 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 ERFEQ4G0M1 354 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CAVIN4Q5BKX8 364 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 NOM1Q5C9Z4 860 aaKnown RBP15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CTR9Q6PD62 1173 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 TMTC3Q6ZXV5 915 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 ZNF652Q9Y2D9 606 aa15.15■□□□□ 0.02
SNRNP200-202ENST00000429650 CASZ1Q86V15 1759 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms