RNA–Protein interactions for RNA: ENST00000428687.1

AL390728.5-201, humanhuman

TSL 3 BASIC

Gene AL390728.5, Length 706 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.5-201ENST00000428687 GTF3C2Q8WUA4 911 aaPredicted RBP23.5■■□□□ 1.35
AL390728.5-201ENST00000428687 GCC1Q96CN9 775 aa23.5■■□□□ 1.35
AL390728.5-201ENST00000428687 MPHOSPH10O00566 681 aaKnown RBP23.49■■□□□ 1.35
AL390728.5-201ENST00000428687 VCAM1P19320 739 aa23.49■■□□□ 1.35
AL390728.5-201ENST00000428687 ERVK-9P63128 1117 aa23.49■■□□□ 1.35
AL390728.5-201ENST00000428687 ERVK-24P63145 666 aa23.49■■□□□ 1.35
AL390728.5-201ENST00000428687 POTEEQ6S8J3 1075 aa23.49■■□□□ 1.35
AL390728.5-201ENST00000428687 UBE2Q1Q7Z7E8 422 aa23.49■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L15C9J2P7 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L13C9JLJ4 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L11C9JVI0 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L18D6R9N7 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L22D6RA61 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L17D6RBQ6 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L19D6RCP7 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L20D6RJB6 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 FARP2O94887 1054 aaPredicted RBP23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 SGPL1O95470 568 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 HMGCRP04035 888 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 USP17L24Q0WX57 530 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 UBE3CQ15386 1083 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 DEFB118Q96PH6 123 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 PORCNQ9H237 461 aa23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 PAK6Q9NQU5 681 aaPredicted RBP23.48■■□□□ 1.35
AL390728.5-201ENST00000428687 Q3C1V9 767 aa23.47■■□□□ 1.35
AL390728.5-201ENST00000428687 DYNLL2Q96FJ2 89 aa23.47■■□□□ 1.35
AL390728.5-201ENST00000428687 DCTPP1Q9H773 170 aa23.47■■□□□ 1.35
AL390728.5-201ENST00000428687 ATP8A2Q9NTI2 1148 aa23.47■■□□□ 1.35
AL390728.5-201ENST00000428687 ECHDC1Q9NTX5 307 aa23.47■■□□□ 1.35
AL390728.5-201ENST00000428687 MAPK4P31152 587 aa23.46■■□□□ 1.35
AL390728.5-201ENST00000428687 TRIM32Q13049 653 aa23.46■■□□□ 1.35
AL390728.5-201ENST00000428687 CCAR1Q8IX12 1150 aaKnown RBP23.46■■□□□ 1.35
AL390728.5-201ENST00000428687 SOCS4Q8WXH5 440 aa23.46■■□□□ 1.35
AL390728.5-201ENST00000428687 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.46■■□□□ 1.35
AL390728.5-201ENST00000428687 SWAP70Q9UH65 585 aa23.46■■□□□ 1.35
AL390728.5-201ENST00000428687 PLXNB2O15031 1838 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 CYP2D7A0A087X1C5 515 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 TFRCP02786 760 aaKnown RBP23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 CYP2B6P20813 491 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 TSHZ3Q63HK5 1081 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 ZSCAN25Q6NSZ9 544 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 CATSPERGQ6ZRH7 1159 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 TRIB2Q92519 343 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 NUDT12Q9BQG2 462 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 RPAP3Q9H6T3 665 aaPredicted RBP23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 RABGAP1Q9Y3P9 1069 aa23.45■■□□□ 1.34
AL390728.5-201ENST00000428687 A0A1W2PRG0 241 aa23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 H0YGN5 161 aa23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 SMIM22K7EJ46 135 aa23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 CNMDO75829 334 aa23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 HABP4Q5JVS0 413 aaKnown RBP23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 TMEM179Q6ZVK1 233 aa23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 GPR142Q7Z601 462 aa23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 GPATCH3Q96I76 525 aa23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 PUS7LQ9H0K6 701 aaKnown RBP23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 SLC4A4Q9Y6R1 1079 aa23.44■■□□□ 1.34
AL390728.5-201ENST00000428687 MYH7P12883 1935 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 USP17L12C9JPN9 530 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 USP17L21D6R901 530 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 AKR1B1P15121 316 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 PLEKHH3Q7Z736 793 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 CLEC10AQ8IUN9 316 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 AMOTL1Q8IY63 956 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 DPF3Q92784 378 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 DDRGK1Q96HY6 314 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 HTATIP2Q9BUP3 242 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 CRISPLD2Q9H0B8 497 aa23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 CWC22Q9HCG8 908 aaKnown RBP23.43■■□□□ 1.34
AL390728.5-201ENST00000428687 BAZ2AQ9UIF9 1905 aaKnown RBP23.42■■□□□ 1.34
AL390728.5-201ENST00000428687 SPDYE16A6NNV3 312 aaPredicted RBP23.42■■□□□ 1.34
AL390728.5-201ENST00000428687 C12orf60Q5U649 245 aa23.42■■□□□ 1.34
AL390728.5-201ENST00000428687 PCDHB15Q9Y5E8 787 aa23.42■■□□□ 1.34
AL390728.5-201ENST00000428687 CEP290O15078 2479 aa23.41■■□□□ 1.34
AL390728.5-201ENST00000428687 XRCC5P13010 732 aaKnown RBP23.41■■□□□ 1.34
AL390728.5-201ENST00000428687 CDK8P49336 464 aa23.41■■□□□ 1.34
AL390728.5-201ENST00000428687 LBX2Q6XYB7 198 aa23.41■■□□□ 1.34
AL390728.5-201ENST00000428687 KBTBD3Q8NAB2 608 aa23.41■■□□□ 1.34
AL390728.5-201ENST00000428687 USP6NLQ92738 828 aa23.41■■□□□ 1.34
AL390728.5-201ENST00000428687 HMX1Q9NP08 348 aaPredicted RBP23.41■■□□□ 1.34
AL390728.5-201ENST00000428687 BTBD7Q9P203 1132 aa23.41■■□□□ 1.34
AL390728.5-201ENST00000428687 RPTORQ8N122 1335 aa23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 ZKSCAN1P17029 563 aaPredicted RBP23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 RGS2P41220 211 aa23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 RRP1P56182 461 aaKnown RBP23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 CCNA1P78396 465 aa23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 ICA1Q05084 483 aa23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 MORN1Q5T089 497 aa23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 WDR78Q5VTH9 848 aa23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 C16orf86Q6ZW13 317 aa23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 TANGO6Q9C0B7 1094 aa23.4■■□□□ 1.34
AL390728.5-201ENST00000428687 PRKAR2AP13861 404 aaKnown RBP23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 CAPN2P17655 700 aa23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 CCL14Q16627 93 aa23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 KIAA1755Q5JYT7 1200 aa23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 MAP3K21Q5TCX8 1036 aa23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 CTR9Q6PD62 1173 aa23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 CCDC17Q96LX7 622 aa23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 APBA2Q99767 749 aa23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 COLQQ9Y215 455 aaPredicted RBP23.39■■□□□ 1.33
AL390728.5-201ENST00000428687 SIAH1Q8IUQ4 282 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms