RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ASNSP08243 561 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 MCM2P49736 904 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 FMR1Q06787 632 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 APOBRQ0VD83 1088 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 TOB2Q14106 344 aaPredicted RBP9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 BECN1Q14457 450 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 SEPT2Q15019 361 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 SEC23AQ15436 765 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 ARMC9Q7Z3E5 817 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 SCYL3Q8IZE3 742 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 LRRC47Q8N1G4 583 aaKnown RBP9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 SMC1BQ8NDV3 1235 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 MTA3Q9BTC8 594 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 KAT14Q9H8E8 782 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 LY9Q9HBG7 655 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 IL17RBQ9NRM6 502 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 TCP11L1Q9NUJ3 509 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 MTMR4Q9NYA4 1195 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 CSADQ9Y600 493 aa9.28□□□□□ -0.92
HMGA1P4-201ENST00000428643 IGKV6D-41A0A0C4DH26 115 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 USP2O75604 605 aaPredicted RBP9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 GUCY1A2P33402 732 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 LIFRP42702 1097 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 JAG1P78504 1218 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 MAP3K9P80192 1104 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 SYNE3Q6ZMZ3 975 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 MOB2Q70IA6 237 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 CATIPQ7Z7H3 387 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 CCDC84Q86UT8 332 aaPredicted RBP9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 SGMS1Q86VZ5 419 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 MICU3Q86XE3 530 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 DGKHQ86XP1 1220 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 RAB11FIP4Q86YS3 637 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 IGDCC4Q8TDY8 1250 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZKSCAN4Q969J2 545 aaPredicted RBP9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 SNX21Q969T3 373 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 KLRG1Q96E93 195 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 FEZ1Q99689 392 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 ALDH8A1Q9H2A2 487 aaPredicted RBP9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 SH2D4AQ9H788 454 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 KANSL2Q9H9L4 492 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 SENP2Q9HC62 589 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 ARHGEF10LQ9HCE6 1279 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 GBA2Q9HCG7 927 aaPredicted RBP9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZNF112Q9UJU3 913 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 TPCN1Q9ULQ1 816 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 LIMCH1Q9UPQ0 1083 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 MTMR7Q9Y216 660 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 SLC12A7Q9Y666 1083 aa9.27□□□□□ -0.93
HMGA1P4-201ENST00000428643 UBE2Q2LH0YL09 131 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 K7ELQ4 463 aaPredicted RBP9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 TOP1P11387 765 aaKnown RBP9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 EEF2P13639 858 aaKnown RBP9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 STK3Q13188 491 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 VGLL4Q14135 290 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 NOL9Q5SY16 702 aaKnown RBP9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 RCSD1Q6JBY9 416 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 ANKRD13AQ8IZ07 590 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZNF654Q8IZM8 581 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 TMTC2Q8N394 836 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 FBXL16Q8N461 479 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 C2orf69Q8N8R5 385 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 PNMA1Q8ND90 353 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 RBM46Q8TBY0 533 aaKnown RBP9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 NUP133Q8WUM0 1156 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 TMEM47Q9BQJ4 181 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 MYL10Q9BUA6 226 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 AGXT2Q9BYV1 514 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 TBC1D2Q9BYX2 928 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 ELP3Q9H9T3 547 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 GINM1Q9NU53 330 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 CLIP2Q9UDT6 1046 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 DAXXQ9UER7 740 aaPredicted RBP9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 BRPF3Q9ULD4 1205 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 ISY1Q9ULR0 285 aaKnown RBP9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 SNCAIPQ9Y6H5 919 aa9.26□□□□□ -0.93
HMGA1P4-201ENST00000428643 GOLGA8AA7E2F4 631 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 USP17L5A8MUK1 530 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZBTB43O43298 467 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 DDAH1O94760 285 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 TOMM70O94826 608 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 LARGE1O95461 756 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 ITGBL1O95965 494 aaPredicted RBP9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 HSP90AA1P07900 732 aaKnown RBP9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 RXRAP19793 462 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 METAP2P50579 478 aaKnown RBP eCLIP9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 FKBP1BP68106 108 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 APOA5Q6Q788 366 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 CCDC144CPQ8IYA2 1237 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 ANKS1AQ92625 1134 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 TMX3Q96JJ7 454 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 CLMNQ96JQ2 1002 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZSCAN31Q96LW9 406 aaPredicted RBP9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 SLKQ9H2G2 1235 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms