RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 SHISA4Q96DD7 197 aa25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 MAP3K14Q99558 947 aa25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 FOXP1Q9H334 677 aaPredicted RBP25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 DBNDD1Q9H9R9 158 aa25.13■■□□□ 1.61
CNEP1R1-202ENST00000427478 SNED1Q8TER0 1413 aa25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 RASA1P20936 1047 aa25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 DGKHQ86XP1 1220 aa25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 FAM43AQ8N2R8 423 aa25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 SRBD1Q8N5C6 995 aaKnown RBP25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 NDUFA8P51970 172 aa25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 NR5A1Q13285 461 aa25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 PTPAQ15257 358 aa25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 C16orf86Q6ZW13 317 aa25.12■■□□□ 1.61
CNEP1R1-202ENST00000427478 XBP1P17861 261 aa25.11■■□□□ 1.61
CNEP1R1-202ENST00000427478 CDK8P49336 464 aa25.11■■□□□ 1.61
CNEP1R1-202ENST00000427478 SASS6Q6UVJ0 657 aa25.11■■□□□ 1.61
CNEP1R1-202ENST00000427478 FMR1NBQ8N0W7 255 aaPredicted RBP25.11■■□□□ 1.61
CNEP1R1-202ENST00000427478 PNMA1Q8ND90 353 aa25.11■■□□□ 1.61
CNEP1R1-202ENST00000427478 ZNF287Q9HBT7 754 aa25.11■■□□□ 1.61
CNEP1R1-202ENST00000427478 WDHD1O75717 1129 aaPredicted RBP25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 SCNN1DP51172 638 aa25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 PICALMQ13492 652 aa25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 AXDND1Q5T1B0 1012 aaPredicted RBP25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 OXER1Q8TDS5 423 aa25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 USP25Q9UHP3 1055 aa25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 CTAGE5O15320 804 aa25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 ANKS1AQ92625 1134 aa25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 TCP11L1Q9NUJ3 509 aa25.1■■□□□ 1.61
CNEP1R1-202ENST00000427478 PPP6R2O75170 966 aa25.09■■□□□ 1.61
CNEP1R1-202ENST00000427478 ANO6Q4KMQ2 910 aa25.09■■□□□ 1.61
CNEP1R1-202ENST00000427478 CCDC178Q5BJE1 867 aa25.09■■□□□ 1.61
CNEP1R1-202ENST00000427478 MYH8P13535 1937 aa25.09■■□□□ 1.61
CNEP1R1-202ENST00000427478 KIF5BP33176 963 aa25.09■■□□□ 1.61
CNEP1R1-202ENST00000427478 JMYQ8N9B5 988 aa25.09■■□□□ 1.61
CNEP1R1-202ENST00000427478 FAM200AQ8TCP9 573 aa25.09■■□□□ 1.61
CNEP1R1-202ENST00000427478 SCN9AQ15858 1988 aa25.08■■□□□ 1.61
CNEP1R1-202ENST00000427478 BAZ2BQ9UIF8 2168 aaKnown RBP25.08■■□□□ 1.61
CNEP1R1-202ENST00000427478 TOB1P50616 345 aaPredicted RBP25.08■■□□□ 1.61
CNEP1R1-202ENST00000427478 PHF20Q9BVI0 1012 aa25.08■■□□□ 1.61
CNEP1R1-202ENST00000427478 RRAGDQ9NQL2 400 aaPredicted RBP25.08■■□□□ 1.61
CNEP1R1-202ENST00000427478 KCNQ5Q9NR82 932 aa25.08■■□□□ 1.61
CNEP1R1-202ENST00000427478 STX8Q9UNK0 236 aa25.08■■□□□ 1.61
CNEP1R1-202ENST00000427478 ZNF646O15015 1829 aaPredicted RBP25.08■■□□□ 1.6
CNEP1R1-202ENST00000427478 PODNQ7Z5L7 613 aa25.07■■□□□ 1.6
CNEP1R1-202ENST00000427478 PIBF1Q8WXW3 757 aa25.07■■□□□ 1.6
CNEP1R1-202ENST00000427478 CNKSR1Q969H4 720 aa25.07■■□□□ 1.6
CNEP1R1-202ENST00000427478 PDGFDQ9GZP0 370 aaPredicted RBP25.07■■□□□ 1.6
CNEP1R1-202ENST00000427478 PFKFB1P16118 471 aa25.06■■□□□ 1.6
CNEP1R1-202ENST00000427478 CMA1P23946 247 aa25.06■■□□□ 1.6
CNEP1R1-202ENST00000427478 KRT2P35908 639 aa25.06■■□□□ 1.6
CNEP1R1-202ENST00000427478 RILPL1Q5EBL4 403 aa25.06■■□□□ 1.6
CNEP1R1-202ENST00000427478 MTMR7Q9Y216 660 aa25.06■■□□□ 1.6
CNEP1R1-202ENST00000427478 TMEM47Q9BQJ4 181 aa25.06■■□□□ 1.6
CNEP1R1-202ENST00000427478 DDX4Q9NQI0 724 aaKnown RBP25.06■■□□□ 1.6
CNEP1R1-202ENST00000427478 USP40Q9NVE5 1235 aa25.06■■□□□ 1.6
CNEP1R1-202ENST00000427478 GRM4Q14833 912 aa25.05■■□□□ 1.6
CNEP1R1-202ENST00000427478 STAG2Q8N3U4 1231 aa25.05■■□□□ 1.6
CNEP1R1-202ENST00000427478 TEKT1Q969V4 418 aa25.05■■□□□ 1.6
CNEP1R1-202ENST00000427478 CABP5Q9NP86 173 aa25.05■■□□□ 1.6
CNEP1R1-202ENST00000427478 ECE2O60344 883 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 SCG2P13521 617 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 CLIC6Q96NY7 704 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 DNAJC25Q9H1X3 360 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 SHC4Q6S5L8 630 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 LUZP1Q86V48 1076 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 NEDD1Q8NHV4 660 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 SDF4Q9BRK5 362 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 CBX8Q9HC52 389 aa25.04■■□□□ 1.6
CNEP1R1-202ENST00000427478 FAM205CA6NFA0 338 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 ESPNB1AK53 854 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 ATP2B1P20020 1258 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 HHIPL2Q6UWX4 724 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 ERCC4Q92889 916 aaPredicted RBP25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 MAD2L2Q9UI95 211 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 PCDHB6Q9Y5E3 794 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 ZNF202O95125 648 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 PLCB2Q00722 1185 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 PFKFB3Q16875 520 aaPredicted RBP25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 DEFB132Q7Z7B7 95 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 BRMS1Q9HCU9 246 aa25.03■■□□□ 1.6
CNEP1R1-202ENST00000427478 CUTAO60888 179 aa25.02■■□□□ 1.6
CNEP1R1-202ENST00000427478 ADCY5O95622 1261 aa25.02■■□□□ 1.6
CNEP1R1-202ENST00000427478 CRKP46108 304 aa25.02■■□□□ 1.6
CNEP1R1-202ENST00000427478 AOC3Q16853 763 aa25.02■■□□□ 1.6
CNEP1R1-202ENST00000427478 EARS2Q5JPH6 523 aaKnown RBP25.02■■□□□ 1.6
CNEP1R1-202ENST00000427478 CDC42EP5Q6NZY7 148 aa25.02■■□□□ 1.6
CNEP1R1-202ENST00000427478 KIAA0825Q8IV33 1275 aa25.02■■□□□ 1.6
CNEP1R1-202ENST00000427478 C7orf43Q8WVR3 580 aa25.02■■□□□ 1.6
CNEP1R1-202ENST00000427478 VEGFAP15692 232 aaPredicted RBP25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 SF3B2Q13435 895 aaKnown RBP25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 APOBEC3HQ6NTF7 200 aaKnown RBP25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 BAG6P46379 1132 aa25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 NPY5RQ15761 445 aa25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 STX1AQ16623 288 aa25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 STRIP1Q5VSL9 837 aa25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 KRI1Q8N9T8 703 aaKnown RBP25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 CEP95Q96GE4 821 aa25.01■■□□□ 1.59
CNEP1R1-202ENST00000427478 ZNF165P49910 485 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms