RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 HSPA12BQ96MM6 686 aa8.92□□□□□ -0.98
C9orf3-205ENST00000427193 SEMA3GQ9NS98 782 aa8.92□□□□□ -0.98
C9orf3-205ENST00000427193 CTNND2Q9UQB3 1225 aa8.92□□□□□ -0.98
C9orf3-205ENST00000427193 PPRC1Q5VV67 1664 aaKnown RBP8.91□□□□□ -0.98
C9orf3-205ENST00000427193 RUSC2Q8N2Y8 1516 aa8.91□□□□□ -0.98
C9orf3-205ENST00000427193 PRR33A8MZF0 331 aa8.91□□□□□ -0.98
C9orf3-205ENST00000427193 GFRA2O00451 464 aa8.91□□□□□ -0.98
C9orf3-205ENST00000427193 EAPPQ56P03 285 aaPredicted RBP8.91□□□□□ -0.98
C9orf3-205ENST00000427193 PRAMEF13Q5VWM6 474 aa8.91□□□□□ -0.98
C9orf3-205ENST00000427193 DUSP9Q99956 384 aaKnown RBP8.91□□□□□ -0.98
C9orf3-205ENST00000427193 PCDHB5Q9Y5E4 795 aa8.91□□□□□ -0.98
C9orf3-205ENST00000427193 CAPN6Q9Y6Q1 641 aa8.91□□□□□ -0.98
C9orf3-205ENST00000427193 EEA1Q15075 1411 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 ASXL2Q76L83 1435 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 CNTNAP4Q9C0A0 1308 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 CYP7A1P22680 504 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 AFMP43652 599 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 LIG3P49916 1009 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 SEPT6Q14141 434 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 KCNMB1Q16558 191 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 CDKAL1Q5VV42 579 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 NPAS4Q8IUM7 802 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 CARS2Q9HA77 564 aaKnown RBP8.9□□□□□ -0.98
C9orf3-205ENST00000427193 FAM53CQ9NYF3 392 aa8.9□□□□□ -0.98
C9orf3-205ENST00000427193 ERICH3Q5RHP9 1530 aa8.9□□□□□ -0.99
C9orf3-205ENST00000427193 KIF27Q86VH2 1401 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 RLBP1P12271 317 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 KIR3DL1P43629 444 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 THAP5Q7Z6K1 395 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 RIN3Q8TB24 985 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 MIR1-1HGQ9H1L0 117 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 ATP13A1Q9HD20 1204 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 ST14Q9Y5Y6 855 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 PLB1Q6P1J6 1458 aa8.89□□□□□ -0.99
C9orf3-205ENST00000427193 ANKRD33BA6NCL7 494 aa8.88□□□□□ -0.99
C9orf3-205ENST00000427193 PKN1Q16512 942 aa8.88□□□□□ -0.99
C9orf3-205ENST00000427193 SND1Q7KZF4 910 aaKnown RBP eCLIP8.88□□□□□ -0.99
C9orf3-205ENST00000427193 KSR1Q8IVT5 923 aa8.88□□□□□ -0.99
C9orf3-205ENST00000427193 MRPL41Q8IXM3 137 aaKnown RBP8.88□□□□□ -0.99
C9orf3-205ENST00000427193 SLC38A3Q99624 504 aa8.88□□□□□ -0.99
C9orf3-205ENST00000427193 ABCC2Q92887 1545 aa8.87□□□□□ -0.99
C9orf3-205ENST00000427193 LRRC10BA6NIK2 292 aa8.87□□□□□ -0.99
C9orf3-205ENST00000427193 H3BS24 57 aa8.87□□□□□ -0.99
C9orf3-205ENST00000427193 XAGE3Q8WTP9 111 aa8.87□□□□□ -0.99
C9orf3-205ENST00000427193 CCDC120Q96HB5 630 aa8.87□□□□□ -0.99
C9orf3-205ENST00000427193 RNF19AQ9NV58 838 aa8.87□□□□□ -0.99
C9orf3-205ENST00000427193 TEX14Q8IWB6 1497 aa8.87□□□□□ -0.99
C9orf3-205ENST00000427193 PRXQ9BXM0 1461 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 ZNF503-AS2A6NEH8 195 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 DBX1A6NMT0 343 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 CBX7O95931 251 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 PGRP06401 933 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 PDE4BQ07343 736 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 ZNF124Q15973 351 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 MAP3K11Q16584 847 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 TSNAXIP1Q2TAA8 658 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 SLC6A19Q695T7 634 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 FAM84AQ96KN4 292 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 NOC4LQ9BVI4 516 aaKnown RBP8.86□□□□□ -0.99
C9orf3-205ENST00000427193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.86□□□□□ -0.99
C9orf3-205ENST00000427193 TJP2Q9UDY2 1190 aa8.86□□□□□ -0.99
C9orf3-205ENST00000427193 TFE3P19532 575 aaPredicted RBP8.85□□□□□ -0.99
C9orf3-205ENST00000427193 GDNFP39905 211 aa8.85□□□□□ -0.99
C9orf3-205ENST00000427193 ST13P50502 369 aaKnown RBP8.85□□□□□ -0.99
C9orf3-205ENST00000427193 RPL6Q02878 288 aaKnown RBP8.85□□□□□ -0.99
C9orf3-205ENST00000427193 MESP2Q0VG99 397 aa8.85□□□□□ -0.99
C9orf3-205ENST00000427193 MEI1Q5TIA1 1274 aa8.85□□□□□ -0.99
C9orf3-205ENST00000427193 DIEXFQ68CQ4 756 aaKnown RBP8.85□□□□□ -0.99
C9orf3-205ENST00000427193 BHLHE22Q8NFJ8 381 aaPredicted RBP8.85□□□□□ -0.99
C9orf3-205ENST00000427193 TMEM87BQ96K49 555 aa8.85□□□□□ -0.99
C9orf3-205ENST00000427193 PTPRGP23470 1445 aa8.85□□□□□ -0.99
C9orf3-205ENST00000427193 GLI1P08151 1106 aa8.84□□□□□ -0.99
C9orf3-205ENST00000427193 DAB2P98082 770 aa8.84□□□□□ -0.99
C9orf3-205ENST00000427193 FYB2Q5VWT5 728 aa8.84□□□□□ -0.99
C9orf3-205ENST00000427193 CDH24Q86UP0 819 aa8.84□□□□□ -0.99
C9orf3-205ENST00000427193 PIWIL2Q8TC59 973 aaKnown RBP8.84□□□□□ -0.99
C9orf3-205ENST00000427193 KIRREL1Q96J84 757 aa8.84□□□□□ -0.99
C9orf3-205ENST00000427193 PARP2Q9UGN5 583 aa8.84□□□□□ -0.99
C9orf3-205ENST00000427193 ADAM30Q9UKF2 790 aa8.84□□□□□ -0.99
C9orf3-205ENST00000427193 EPRSP07814 1512 aaKnown RBP8.84□□□□□ -0.99
C9orf3-205ENST00000427193 PTPRMP28827 1452 aa8.83□□□□□ -1
C9orf3-205ENST00000427193 ETV3P41162 512 aa8.83□□□□□ -1
C9orf3-205ENST00000427193 TNK2Q07912 1038 aa8.83□□□□□ -1
C9orf3-205ENST00000427193 PSMD2Q13200 908 aa8.83□□□□□ -1
C9orf3-205ENST00000427193 TAF1CQ15572 869 aaPredicted RBP8.83□□□□□ -1
C9orf3-205ENST00000427193 MLANAQ16655 118 aa8.83□□□□□ -1
C9orf3-205ENST00000427193 MCATQ8IVS2 390 aaKnown RBP8.83□□□□□ -1
C9orf3-205ENST00000427193 UBE2FQ969M7 185 aa8.83□□□□□ -1
C9orf3-205ENST00000427193 DPH2Q9BQC3 489 aaPredicted RBP8.83□□□□□ -1
C9orf3-205ENST00000427193 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
C9orf3-205ENST00000427193 KIAA0586Q9BVV6 1533 aa8.82□□□□□ -1
C9orf3-205ENST00000427193 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.82□□□□□ -1
C9orf3-205ENST00000427193 ALPK1Q96QP1 1244 aa8.82□□□□□ -1
C9orf3-205ENST00000427193 ZSWIM5Q9P217 1185 aa8.82□□□□□ -1
C9orf3-205ENST00000427193 MAP3K4Q9Y6R4 1608 aa8.82□□□□□ -1
C9orf3-205ENST00000427193 TMEM67Q5HYA8 995 aa8.81□□□□□ -1
C9orf3-205ENST00000427193 TMPRSS7Q7RTY8 843 aa8.81□□□□□ -1
C9orf3-205ENST00000427193 CCDC84Q86UT8 332 aaPredicted RBP8.81□□□□□ -1
C9orf3-205ENST00000427193 LIN37Q96GY3 246 aaPredicted RBP8.81□□□□□ -1
C9orf3-205ENST00000427193 TLR6Q9Y2C9 796 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms