RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 BCRP11274 1271 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 CDK8P49336 464 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 LACTBP83111 547 aaPredicted RBP16.33■□□□□ 0.2
SNX3-204ENST00000426155 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.2
SNX3-204ENST00000426155 FBXO46Q6PJ61 603 aaPredicted RBP16.33■□□□□ 0.2
SNX3-204ENST00000426155 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 RILPL2Q969X0 211 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 FAM227BQ96M60 508 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 FEZ1Q99689 392 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 CABP5Q9NP86 173 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 EMILIN3Q9NT22 766 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 SLC45A1Q9Y2W3 748 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 PARP14Q460N5 1801 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 MYH4Q9Y623 1939 aa16.33■□□□□ 0.2
SNX3-204ENST00000426155 MINDY4BA8MYZ0 360 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 PEX10O60683 326 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 TDO2P48775 406 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 AMOTL1Q8IY63 956 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 DOCK3Q8IZD9 2030 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
SNX3-204ENST00000426155 ROBO3Q96MS0 1386 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 SWAP70Q9UH65 585 aa16.32■□□□□ 0.2
SNX3-204ENST00000426155 A0A1W2PRG0 241 aa16.31■□□□□ 0.2
SNX3-204ENST00000426155 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
SNX3-204ENST00000426155 GNAT2P19087 354 aa16.31■□□□□ 0.2
SNX3-204ENST00000426155 NMIQ13287 307 aaPredicted RBP16.31■□□□□ 0.2
SNX3-204ENST00000426155 PKN2Q16513 984 aaKnown RBP16.31■□□□□ 0.2
SNX3-204ENST00000426155 SBK1Q52WX2 424 aa16.31■□□□□ 0.2
SNX3-204ENST00000426155 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
SNX3-204ENST00000426155 ANKRD13CQ8N6S4 541 aa16.31■□□□□ 0.2
SNX3-204ENST00000426155 ASCC2Q9H1I8 757 aaPredicted RBP16.31■□□□□ 0.2
SNX3-204ENST00000426155 OSBPL3Q9H4L5 887 aa16.31■□□□□ 0.2
SNX3-204ENST00000426155 PTPN22Q9Y2R2 807 aa16.31■□□□□ 0.2
SNX3-204ENST00000426155 RLFQ13129 1914 aa16.3■□□□□ 0.2
SNX3-204ENST00000426155 C19orf81C9J6K1 198 aa16.3■□□□□ 0.2
SNX3-204ENST00000426155 PATL2C9JE40 543 aaKnown RBP16.3■□□□□ 0.2
SNX3-204ENST00000426155 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
SNX3-204ENST00000426155 USP17L2Q6R6M4 530 aa16.3■□□□□ 0.2
SNX3-204ENST00000426155 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
SNX3-204ENST00000426155 TRIM47Q96LD4 638 aa16.3■□□□□ 0.2
SNX3-204ENST00000426155 PNMA3Q9UL41 463 aa16.3■□□□□ 0.2
SNX3-204ENST00000426155 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
SNX3-204ENST00000426155 PLXNB2O15031 1838 aa16.29■□□□□ 0.2
SNX3-204ENST00000426155 LAMA4Q16363 1823 aa16.29■□□□□ 0.2
SNX3-204ENST00000426155 PRDM1O75626 825 aa16.29■□□□□ 0.2
SNX3-204ENST00000426155 PSMC4P43686 418 aa16.29■□□□□ 0.2
SNX3-204ENST00000426155 SOX10P56693 466 aa16.29■□□□□ 0.2
SNX3-204ENST00000426155 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
SNX3-204ENST00000426155 BRCA2P51587 3418 aa16.29■□□□□ 0.2
SNX3-204ENST00000426155 A0A0G2JMZ2 1700 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 GSPT1P15170 499 aaKnown RBP16.28■□□□□ 0.2
SNX3-204ENST00000426155 VCAM1P19320 739 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 RASA1P20936 1047 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 OSBPP22059 807 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
SNX3-204ENST00000426155 ICA1Q05084 483 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNX3-204ENST00000426155 KIF22Q14807 665 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 KIAA1755Q5JYT7 1200 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 SIAH1Q8IUQ4 282 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 C12orf42Q96LP6 360 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 P2RX7Q99572 595 aaKnown RBP16.28■□□□□ 0.2
SNX3-204ENST00000426155 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNX3-204ENST00000426155 KIAA1683Q9H0B3 1180 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 NAPBQ9H115 298 aa16.28■□□□□ 0.2
SNX3-204ENST00000426155 COL11A1P12107 1806 aaPredicted RBP16.28■□□□□ 0.2
SNX3-204ENST00000426155 RBBP6Q7Z6E9 1792 aaKnown RBP16.28■□□□□ 0.2
SNX3-204ENST00000426155 FMNL1O95466 1100 aaPredicted RBP16.27■□□□□ 0.2
SNX3-204ENST00000426155 SDSP20132 328 aa16.27■□□□□ 0.2
SNX3-204ENST00000426155 HOXA7P31268 230 aaPredicted RBP16.27■□□□□ 0.2
SNX3-204ENST00000426155 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
SNX3-204ENST00000426155 NACAP1Q9BZK3 213 aa16.27■□□□□ 0.2
SNX3-204ENST00000426155 HELLSQ9NRZ9 838 aa16.27■□□□□ 0.2
SNX3-204ENST00000426155 HERVK_113P62684 666 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 ATP2B2Q01814 1243 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 FAM110CQ1W6H9 321 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 CCDC17Q96LX7 622 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 RPAP3Q9H6T3 665 aaPredicted RBP16.26■□□□□ 0.19
SNX3-204ENST00000426155 TXNRD2Q9NNW7 524 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 TACC3Q9Y6A5 838 aa16.26■□□□□ 0.19
SNX3-204ENST00000426155 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
SNX3-204ENST00000426155 USP14P54578 494 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 FCGRTP55899 365 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 PRKCZQ05513 592 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 PPARAQ07869 468 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 TTC22Q5TAA0 569 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 SPICE1Q8N0Z3 855 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 MKNK2Q9HBH9 465 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 TAOK2Q9UL54 1235 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 GABRQQ9UN88 632 aa16.25■□□□□ 0.19
SNX3-204ENST00000426155 CCDC171Q6TFL3 1326 aa16.24■□□□□ 0.19
SNX3-204ENST00000426155 GCLCP48506 637 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms