RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 PIBF1Q8WXW3 757 aa20.17■□□□□ 0.82
FN1-208ENST00000426059 CEP95Q96GE4 821 aa20.17■□□□□ 0.82
FN1-208ENST00000426059 TMEM47Q9BQJ4 181 aa20.17■□□□□ 0.82
FN1-208ENST00000426059 VPS33BQ9H267 617 aa20.17■□□□□ 0.82
FN1-208ENST00000426059 EIF6P56537 245 aaKnown RBP20.16■□□□□ 0.82
FN1-208ENST00000426059 TRIM22Q8IYM9 498 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 TMEM87AQ8NBN3 555 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 NEDD1Q8NHV4 660 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.16■□□□□ 0.82
FN1-208ENST00000426059 IDI2Q9BXS1 227 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 TCP11L1Q9NUJ3 509 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 HLA-DOAP06340 250 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 DEKP35659 375 aaKnown RBP20.16■□□□□ 0.82
FN1-208ENST00000426059 FUT2Q10981 343 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 OGFOD1Q8N543 542 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 SRBD1Q8N5C6 995 aaKnown RBP20.16■□□□□ 0.82
FN1-208ENST00000426059 CTCFLQ8NI51 663 aaPredicted RBP20.16■□□□□ 0.82
FN1-208ENST00000426059 DNAJC18Q9H819 358 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 MYH15Q9Y2K3 1946 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 MYO3BQ8WXR4 1341 aa20.16■□□□□ 0.82
FN1-208ENST00000426059 TCP10L2B9ZVM9 353 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 CALM1P0DP23 149 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 CALM2P0DP24 149 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 CALM3P0DP25 149 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 SHMT1P34896 483 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 STAG2Q8N3U4 1231 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 KCNJ14Q9UNX9 436 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 V9GY48 417 aaPredicted RBP20.15■□□□□ 0.82
FN1-208ENST00000426059 STK36Q9NRP7 1315 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 SIPA1L1O43166 1804 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 SPDYE2BA6NHP3 402 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 SPDYE6P0CI01 402 aa20.15■□□□□ 0.82
FN1-208ENST00000426059 SHROOM1Q2M3G4 852 aaPredicted RBP20.15■□□□□ 0.82
FN1-208ENST00000426059 DLGAP5Q15398 846 aa20.14■□□□□ 0.82
FN1-208ENST00000426059 CIAPIN1Q6FI81 312 aa20.14■□□□□ 0.82
FN1-208ENST00000426059 TMTC3Q6ZXV5 915 aa20.14■□□□□ 0.82
FN1-208ENST00000426059 ANKS1AQ92625 1134 aa20.14■□□□□ 0.82
FN1-208ENST00000426059 SPATA32Q96LK8 384 aa20.14■□□□□ 0.82
FN1-208ENST00000426059 HDAC9Q9UKV0 1011 aa20.14■□□□□ 0.82
FN1-208ENST00000426059 KIF23Q02241 960 aaPredicted RBP20.14■□□□□ 0.81
FN1-208ENST00000426059 USP28Q96RU2 1077 aa20.14■□□□□ 0.81
FN1-208ENST00000426059 RBM28Q9NW13 759 aaKnown RBP20.14■□□□□ 0.81
FN1-208ENST00000426059 TMEM63CQ9P1W3 806 aa20.14■□□□□ 0.81
FN1-208ENST00000426059 SCAF8Q9UPN6 1271 aaKnown RBP20.14■□□□□ 0.81
FN1-208ENST00000426059 MPHOSPH10O00566 681 aaKnown RBP20.13■□□□□ 0.81
FN1-208ENST00000426059 DEXIO95424 95 aa20.13■□□□□ 0.81
FN1-208ENST00000426059 GOLGA8HP0CJ92 632 aa20.13■□□□□ 0.81
FN1-208ENST00000426059 PKN1Q16512 942 aa20.13■□□□□ 0.81
FN1-208ENST00000426059 LEO1Q8WVC0 666 aaPredicted RBP20.13■□□□□ 0.81
FN1-208ENST00000426059 SHISA4Q96DD7 197 aa20.13■□□□□ 0.81
FN1-208ENST00000426059 SPON1Q9HCB6 807 aa20.13■□□□□ 0.81
FN1-208ENST00000426059 TRIM29Q14134 588 aa20.13■□□□□ 0.81
FN1-208ENST00000426059 PPP2R5BQ15173 497 aa20.13■□□□□ 0.81
FN1-208ENST00000426059 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
FN1-208ENST00000426059 AKAP17AQ02040 695 aaKnown RBP20.12■□□□□ 0.81
FN1-208ENST00000426059 RNF26Q9BY78 433 aaPredicted RBP20.12■□□□□ 0.81
FN1-208ENST00000426059 CPVLQ9H3G5 476 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 CNTNAP5Q8WYK1 1306 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 UBE2HP62256 183 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 CCDC178Q5BJE1 867 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 AGBL3Q8NEM8 1001 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 DHX36Q9H2U1 1008 aaKnown RBP20.12■□□□□ 0.81
FN1-208ENST00000426059 VEZTQ9HBM0 779 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 VPS54Q9P1Q0 977 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 PI4KBQ9UBF8 816 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 ZNF70Q9UC06 446 aaPredicted RBP20.12■□□□□ 0.81
FN1-208ENST00000426059 SWAP70Q9UH65 585 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 MAD2L2Q9UI95 211 aa20.12■□□□□ 0.81
FN1-208ENST00000426059 WASF1Q92558 559 aa20.11■□□□□ 0.81
FN1-208ENST00000426059 SCAND2PQ9GZW5 306 aaPredicted RBP20.11■□□□□ 0.81
FN1-208ENST00000426059 MTMR4Q9NYA4 1195 aa20.11■□□□□ 0.81
FN1-208ENST00000426059 MBD3O95983 291 aa20.1■□□□□ 0.81
FN1-208ENST00000426059 EGFRP00533 1210 aa20.1■□□□□ 0.81
FN1-208ENST00000426059 NT5C2P49902 561 aa20.1■□□□□ 0.81
FN1-208ENST00000426059 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
FN1-208ENST00000426059 NBPF9Q3BBW0 867 aa20.1■□□□□ 0.81
FN1-208ENST00000426059 RBM26Q5T8P6 1007 aaKnown RBP20.1■□□□□ 0.81
FN1-208ENST00000426059 LRRC47Q8N1G4 583 aaKnown RBP20.1■□□□□ 0.81
FN1-208ENST00000426059 FHDC1Q9C0D6 1143 aaPredicted RBP20.1■□□□□ 0.81
FN1-208ENST00000426059 PRPF3O43395 683 aaKnown RBP20.1■□□□□ 0.81
FN1-208ENST00000426059 CSPP1Q1MSJ5 1256 aa20.1■□□□□ 0.81
FN1-208ENST00000426059 USP17L2Q6R6M4 530 aa20.1■□□□□ 0.81
FN1-208ENST00000426059 EHD4Q9H223 541 aa20.1■□□□□ 0.81
FN1-208ENST00000426059 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
FN1-208ENST00000426059 BTBD18B2RXH4 712 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 ATP2B2Q01814 1243 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 GRM4Q14833 912 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 CSRNP1Q96S65 589 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 CLIP2Q9UDT6 1046 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 CFAP45Q9UL16 551 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 KIF5BP33176 963 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 SLC35G1Q2M3R5 365 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 ZSCAN23Q3MJ62 389 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 MYSM1Q5VVJ2 828 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 TMOD2Q9NZR1 351 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 CLIC4Q9Y696 253 aa20.09■□□□□ 0.81
FN1-208ENST00000426059 MMP1P03956 469 aa20.08■□□□□ 0.81
FN1-208ENST00000426059 TOP1P11387 765 aaKnown RBP20.08■□□□□ 0.81
FN1-208ENST00000426059 OXER1Q8TDS5 423 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms