RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-211ENST00000425989 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
HDLBP-211ENST00000425989 DEXIO95424 95 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 F13A1P00488 732 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 ADD1P35611 737 aaKnown RBP11.17□□□□□ -0.62
HDLBP-211ENST00000425989 GMPSP49915 693 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-211ENST00000425989 RASSF7Q02833 373 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 TCP10Q12799 353 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 TRIM29Q14134 588 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 RBM26Q5T8P6 1007 aaKnown RBP11.17□□□□□ -0.62
HDLBP-211ENST00000425989 RCSD1Q6JBY9 416 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 TMEM179Q6ZVK1 233 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 MICU3Q86XE3 530 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 PNMA1Q8ND90 353 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-211ENST00000425989 NYAP2Q9P242 653 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 MTMR6Q9Y217 621 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 ZDHHC9Q9Y397 364 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 GJA3Q9Y6H8 435 aa11.17□□□□□ -0.62
HDLBP-211ENST00000425989 IGKV6D-41A0A0C4DH26 115 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 BAG4O95429 457 aaKnown RBP11.16□□□□□ -0.62
HDLBP-211ENST00000425989 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-211ENST00000425989 SHMT1P34896 483 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 APOBEC3FQ8IUX4 373 aaKnown RBP11.16□□□□□ -0.62
HDLBP-211ENST00000425989 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 FBXO18Q8NFZ0 1043 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 NUP133Q8WUM0 1156 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 C8orf76Q96K31 380 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 CSRNP1Q96S65 589 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 TMEM47Q9BQJ4 181 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.622e-8■□□□□ 11.1
HDLBP-211ENST00000425989 NCOA5Q9HCD5 579 aaKnown RBP11.16□□□□□ -0.62
HDLBP-211ENST00000425989 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 CFAP45Q9UL16 551 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 STX8Q9UNK0 236 aa11.16□□□□□ -0.62
HDLBP-211ENST00000425989 MYH6P13533 1939 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 TCP10L2B9ZVM9 353 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 SMIM22K7EJ46 135 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
HDLBP-211ENST00000425989 CDC27P30260 824 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 GRM4Q14833 912 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 SAFBQ15424 915 aaKnown RBP eCLIP11.15□□□□□ -0.62
HDLBP-211ENST00000425989 GPR162Q16538 588 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 SH3BP5LQ7L8J4 393 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 NKX2-3Q8TAU0 364 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 DDX11Q96FC9 970 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 SENP2Q9HC62 589 aa11.15□□□□□ -0.62
HDLBP-211ENST00000425989 PITPNM2Q9BZ72 1349 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 TCHHQ07283 1943 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 PALM3A6NDB9 673 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-211ENST00000425989 JAK2O60674 1132 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 NCLP19338 710 aaKnown RBP11.14□□□□□ -0.63
HDLBP-211ENST00000425989 PRELPP51888 382 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 ABCB5Q2M3G0 1257 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 NBPF9Q3BBW0 867 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 SUPT20HL1Q3ZLR7 823 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 ASPRV1Q53RT3 343 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 GPATCH4Q5T3I0 446 aaKnown RBP11.14□□□□□ -0.63
HDLBP-211ENST00000425989 DCAF15Q66K64 600 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 BRAPQ7Z569 592 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 NBPF11Q86T75 865 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 SLC44A5Q8NCS7 719 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
HDLBP-211ENST00000425989 CEP95Q96GE4 821 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 ZNF396Q96N95 335 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-211ENST00000425989 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 SCAND2PQ9GZW5 306 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-211ENST00000425989 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 SH3GLB2Q9NR46 395 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 ADARB2Q9NS39 739 aaKnown RBP11.14□□□□□ -0.63
HDLBP-211ENST00000425989 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 PCDHAC2Q9Y5I4 1007 aa11.14□□□□□ -0.63
HDLBP-211ENST00000425989 CLRN2A0PK11 232 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 VPS37CA5D8V6 355 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-211ENST00000425989 hCG_1984214I3L0E3 225 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 MPHOSPH10O00566 681 aaKnown RBP11.13□□□□□ -0.63
HDLBP-211ENST00000425989 PARP1P09874 1014 aaKnown RBP11.13□□□□□ -0.63
HDLBP-211ENST00000425989 AKR1B1P15121 316 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 CACNB3P54284 484 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 TRAF1Q13077 416 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 RASA3Q14644 834 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 C9orf131Q5VYM1 1079 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 GALNT17Q6IS24 598 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 TMTC3Q6ZXV5 915 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 TEX2Q8IWB9 1127 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 ZNF713Q8N859 430 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-211ENST00000425989 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDLBP-211ENST00000425989 SPZ1Q9BXG8 430 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 ARHGEF10LQ9HCE6 1279 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 CLIP2Q9UDT6 1046 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 PGAP2Q9UHJ9 254 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 CNTNAP1P78357 1384 aa11.13□□□□□ -0.63
HDLBP-211ENST00000425989 NMT2O60551 498 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 ASNSP08243 561 aa11.12□□□□□ -0.63
HDLBP-211ENST00000425989 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms