RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 SIRT5Q9NXA8 310 aa5.1□□□□□ -1.59
R3HDM1-205ENST00000425804 IRS4O14654 1257 aaPredicted RBP5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 GADD45BO75293 160 aaPredicted RBP5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 NME2P22392 152 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 TPP2P29144 1249 aaPredicted RBP5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 SLBPQ14493 270 aaKnown RBP eCLIP5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 SNX17Q15036 470 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 GAB4Q2WGN9 574 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 LETMD1Q6P1Q0 360 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 DTHD1Q6ZMT9 781 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 TMEFF1Q8IYR6 380 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 PPP1R13LQ8WUF5 828 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 SHISA4Q96DD7 197 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 CNTD2Q9H8S5 307 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 CBX8Q9HC52 389 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 TRAK1Q9UPV9 953 aa5.09□□□□□ -1.59
R3HDM1-205ENST00000425804 ADAM17P78536 824 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 EGR3Q06889 387 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 GRM2Q14416 872 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 ZFYVE27Q5T4F4 411 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 ADGRF1Q5T601 910 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 FAM129CQ86XR2 697 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 MFSD2AQ8NA29 543 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 TP53I13Q8NBR0 393 aaPredicted RBP5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 COX4I2Q96KJ9 171 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 MRIQ9BWK5 157 aa5.08□□□□□ -1.6
R3HDM1-205ENST00000425804 HRKO00198 91 aa5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 CPNE3O75131 537 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 NEFLP07196 543 aa5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 CYP7A1P22680 504 aa5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 ORC1Q13415 861 aa5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 NKG7Q16617 165 aa5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 PIWIL2Q8TC59 973 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 DHX38Q92620 1227 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 VWCEQ96DN2 955 aa5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 SLITRK6Q9H5Y7 841 aa5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 DUSP13Q9UII6 198 aa5.07□□□□□ -1.6
R3HDM1-205ENST00000425804 SLPIP03973 132 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 FCGRTP55899 365 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 CRB2Q5IJ48 1285 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 UBXN11Q5T124 520 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 SPPL2CQ8IUH8 684 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 SIRT2Q8IXJ6 389 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 GRIN3AQ8TCU5 1115 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 CCDC74AQ96AQ1 378 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 DUSP15Q9H1R2 295 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 WDR26Q9H7D7 661 aa5.06□□□□□ -1.6
R3HDM1-205ENST00000425804 VIPR1P32241 457 aa5.05□□□□□ -1.6
R3HDM1-205ENST00000425804 CAP2P40123 477 aa5.05□□□□□ -1.6
R3HDM1-205ENST00000425804 CHRNEQ04844 493 aa5.05□□□□□ -1.6
R3HDM1-205ENST00000425804 PWWP2AQ96N64 755 aa5.05□□□□□ -1.6
R3HDM1-205ENST00000425804 PRAMEF27A3QJZ7 478 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 TRIM37O94972 964 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 KCNC1P48547 511 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 CDR1P51861 262 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 CDH24Q86UP0 819 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 XAGE3Q8WTP9 111 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 MZB1Q8WU39 189 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 ELMO3Q96BJ8 720 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 TRIT1Q9H3H1 467 aaKnown RBP5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 EBF1Q9UH73 591 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 PCDHA4Q9UN74 947 aa5.04□□□□□ -1.6
R3HDM1-205ENST00000425804 C6P13671 934 aa5.03□□□□□ -1.6
R3HDM1-205ENST00000425804 GDF5P43026 501 aa5.03□□□□□ -1.6
R3HDM1-205ENST00000425804 FERMT3Q86UX7 667 aa5.03□□□□□ -1.6
R3HDM1-205ENST00000425804 Q96M66 194 aa5.03□□□□□ -1.6
R3HDM1-205ENST00000425804 SMPD4Q9NXE4 827 aa5.03□□□□□ -1.6
R3HDM1-205ENST00000425804 PCDHA11Q9Y5I1 949 aa5.03□□□□□ -1.6
R3HDM1-205ENST00000425804 C1QTNF3-AMACRE9PGA6 284 aa5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 EFEMP2O95967 443 aa5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 LTKP29376 864 aa5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 SLURP1P55000 103 aa5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 PLCB3Q01970 1234 aa5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 FKBP4Q02790 459 aaKnown RBP eCLIP5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 SF3B2Q13435 895 aaKnown RBP5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 PRAMEF13Q5VWM6 474 aa5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 NLRX1Q86UT6 975 aa5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 ANKS4BQ8N8V4 417 aa5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 SYTL4Q96C24 671 aaPredicted RBP5.02□□□□□ -1.61
R3HDM1-205ENST00000425804 NOTOA8MTQ0 251 aa5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 FFAR3O14843 346 aa5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 DUSP4Q13115 394 aa5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 INPP5AQ14642 412 aa5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 TSPYL5Q86VY4 417 aaPredicted RBP5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 IGDCC3Q8IVU1 814 aa5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 ZFPM1Q8IX07 1006 aa5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 GPATCH2Q9NW75 528 aa5.01□□□□□ -1.61
R3HDM1-205ENST00000425804 CST3P01034 146 aaPredicted RBP5□□□□□ -1.61
R3HDM1-205ENST00000425804 XRCC5P13010 732 aaKnown RBP5□□□□□ -1.61
R3HDM1-205ENST00000425804 TACR2P21452 398 aa5□□□□□ -1.61
R3HDM1-205ENST00000425804 BMP6P22004 513 aa5□□□□□ -1.61
R3HDM1-205ENST00000425804 CPZQ66K79 652 aa5□□□□□ -1.61
R3HDM1-205ENST00000425804 LRFN4Q6PJG9 635 aa5□□□□□ -1.61
R3HDM1-205ENST00000425804 EPS8L3Q8TE67 593 aaKnown RBP5□□□□□ -1.61
R3HDM1-205ENST00000425804 WNT10AQ9GZT5 417 aa5□□□□□ -1.61
R3HDM1-205ENST00000425804 AKAP2Q9Y2D5 859 aa5□□□□□ -1.61
R3HDM1-205ENST00000425804 CYR61O00622 381 aa4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 EIF1AYO14602 144 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-205ENST00000425804 SDHBP21912 280 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms