RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 USP17L15C9J2P7 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 USP17L13C9JLJ4 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 USP17L11C9JVI0 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 USP17L18D6R9N7 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 USP17L22D6RA61 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 USP17L17D6RBQ6 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 USP17L19D6RCP7 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 USP17L20D6RJB6 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 USP17L24Q0WX57 530 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 CATSPERGQ6ZRH7 1159 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 KIAA1683Q9H0B3 1180 aa21.42■■□□□ 1.02
HDAC7-208ENST00000425451 MAGEA10P43363 369 aaPredicted RBP21.41■■□□□ 1.02
HDAC7-208ENST00000425451 PLCD1P51178 756 aa21.41■■□□□ 1.02
HDAC7-208ENST00000425451 CEP85Q6P2H3 762 aa21.41■■□□□ 1.02
HDAC7-208ENST00000425451 CCAR1Q8IX12 1150 aaKnown RBP21.41■■□□□ 1.02
HDAC7-208ENST00000425451 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
HDAC7-208ENST00000425451 ACER1Q8TDN7 264 aa21.41■■□□□ 1.02
HDAC7-208ENST00000425451 APBA2Q99767 749 aa21.41■■□□□ 1.02
HDAC7-208ENST00000425451 VCAM1P19320 739 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 GUCY1A2P33402 732 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 SHMT1P34896 483 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 MAP3K12Q12852 859 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 MAP2K5Q13163 448 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 RAB3GAP1Q15042 981 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 CERKLQ49MI3 558 aaPredicted RBP21.4■■□□□ 1.02
HDAC7-208ENST00000425451 TTC6Q86TZ1 520 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 FEZ1Q99689 392 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 RIOK1Q9BRS2 568 aaKnown RBP21.4■■□□□ 1.02
HDAC7-208ENST00000425451 FLRT1Q9NZU1 646 aa21.4■■□□□ 1.02
HDAC7-208ENST00000425451 ABCB5Q2M3G0 1257 aa21.39■■□□□ 1.01
HDAC7-208ENST00000425451 TMED8Q6PL24 325 aaPredicted RBP21.39■■□□□ 1.01
HDAC7-208ENST00000425451 LBX2Q6XYB7 198 aa21.39■■□□□ 1.01
HDAC7-208ENST00000425451 EDC3Q96F86 508 aaKnown RBP21.39■■□□□ 1.01
HDAC7-208ENST00000425451 BTBD7Q9P203 1132 aa21.39■■□□□ 1.01
HDAC7-208ENST00000425451 EXOC6BQ9Y2D4 811 aa21.39■■□□□ 1.01
HDAC7-208ENST00000425451 COL6A3P12111 3177 aa21.39■■□□□ 1.01
HDAC7-208ENST00000425451 USP14P54578 494 aa21.38■■□□□ 1.01
HDAC7-208ENST00000425451 LRRC26Q2I0M4 334 aa21.38■■□□□ 1.01
HDAC7-208ENST00000425451 LRIT3Q3SXY7 679 aa21.38■■□□□ 1.01
HDAC7-208ENST00000425451 GPR153Q6NV75 609 aa21.38■■□□□ 1.01
HDAC7-208ENST00000425451 AACSQ86V21 672 aa21.38■■□□□ 1.01
HDAC7-208ENST00000425451 SLC15A5A6NIM6 579 aa21.37■■□□□ 1.01
HDAC7-208ENST00000425451 PTPREP23469 700 aa21.37■■□□□ 1.01
HDAC7-208ENST00000425451 CCNA1P78396 465 aa21.37■■□□□ 1.01
HDAC7-208ENST00000425451 EVX2Q03828 476 aa21.37■■□□□ 1.01
HDAC7-208ENST00000425451 GABPAQ06546 454 aa21.37■■□□□ 1.01
HDAC7-208ENST00000425451 SPDYE16A6NNV3 312 aaPredicted RBP21.36■■□□□ 1.01
HDAC7-208ENST00000425451 IGHA2P01877 340 aa21.36■■□□□ 1.01
HDAC7-208ENST00000425451 TDHQ8IZJ6 230 aa21.36■■□□□ 1.01
HDAC7-208ENST00000425451 SLC17A8Q8NDX2 589 aa21.36■■□□□ 1.01
HDAC7-208ENST00000425451 CABP5Q9NP86 173 aa21.36■■□□□ 1.01
HDAC7-208ENST00000425451 GLRX3O76003 335 aaKnown RBP21.35■■□□□ 1.01
HDAC7-208ENST00000425451 HOXC6P09630 235 aa21.35■■□□□ 1.01
HDAC7-208ENST00000425451 SEPT2Q15019 361 aa21.35■■□□□ 1.01
HDAC7-208ENST00000425451 ERC1Q8IUD2 1116 aa21.35■■□□□ 1.01
HDAC7-208ENST00000425451 RPAP3Q9H6T3 665 aaPredicted RBP21.35■■□□□ 1.01
HDAC7-208ENST00000425451 CWC22Q9HCG8 908 aaKnown RBP21.35■■□□□ 1.01
HDAC7-208ENST00000425451 IL1RAPL2Q9NP60 686 aa21.35■■□□□ 1.01
HDAC7-208ENST00000425451 MAGEB6P1A0A0J9YX57 407 aa21.34■■□□□ 1.01
HDAC7-208ENST00000425451 A0A1W2PRG0 241 aa21.34■■□□□ 1.01
HDAC7-208ENST00000425451 GRB14Q14449 540 aa21.34■■□□□ 1.01
HDAC7-208ENST00000425451 WDR78Q5VTH9 848 aa21.34■■□□□ 1.01
HDAC7-208ENST00000425451 MFSD14CQ5VZR4 134 aa21.34■■□□□ 1.01
HDAC7-208ENST00000425451 NPLOC4Q8TAT6 608 aa21.34■■□□□ 1.01
HDAC7-208ENST00000425451 RHPN1Q8TCX5 695 aa21.34■■□□□ 1.01
HDAC7-208ENST00000425451 UBE2OQ9C0C9 1292 aaKnown RBP21.34■■□□□ 1.01
HDAC7-208ENST00000425451 POLR3DP05423 398 aaPredicted RBP21.33■■□□□ 1.01
HDAC7-208ENST00000425451 PDE6AP16499 860 aa21.33■■□□□ 1.01
HDAC7-208ENST00000425451 HNRNPUQ00839 825 aaKnown RBP eCLIP21.33■■□□□ 1.013e-6■□□□□ 11.1
HDAC7-208ENST00000425451 SLC9C2Q5TAH2 1124 aa21.33■■□□□ 1.01
HDAC7-208ENST00000425451 Q7L0L9 218 aa21.33■■□□□ 1.01
HDAC7-208ENST00000425451 DEFB123Q8N688 67 aa21.33■■□□□ 1.01
HDAC7-208ENST00000425451 PANK1Q8TE04 598 aa21.33■■□□□ 1.01
HDAC7-208ENST00000425451 FRMPD3Q5JV73 1810 aa21.33■■□□□ 1.01
HDAC7-208ENST00000425451 CYP2C19P33261 490 aa21.32■■□□□ 1
HDAC7-208ENST00000425451 TTF1Q15361 905 aaPredicted RBP21.32■■□□□ 1
HDAC7-208ENST00000425451 TRPV1Q8NER1 839 aa21.32■■□□□ 1
HDAC7-208ENST00000425451 MCM9Q9NXL9 1143 aa21.32■■□□□ 1
HDAC7-208ENST00000425451 DDX20Q9UHI6 824 aaKnown RBP21.32■■□□□ 1
HDAC7-208ENST00000425451 TCRBV5S4A2TA0A5A2 114 aa21.31■■□□□ 1
HDAC7-208ENST00000425451 ATP2B2Q01814 1243 aa21.31■■□□□ 1
HDAC7-208ENST00000425451 KIAA1755Q5JYT7 1200 aa21.31■■□□□ 1
HDAC7-208ENST00000425451 CRNKL1Q9BZJ0 848 aaKnown RBP21.31■■□□□ 1
HDAC7-208ENST00000425451 DCP1AQ9NPI6 582 aaPredicted RBP21.31■■□□□ 1
HDAC7-208ENST00000425451 IVNS1ABPQ9Y6Y0 642 aa21.31■■□□□ 1
HDAC7-208ENST00000425451 ZNF532Q9HCE3 1301 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 NAV1Q8NEY1 1877 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 DLL1O00548 723 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 MDM2Q00987 491 aaPredicted RBP21.3■■□□□ 1
HDAC7-208ENST00000425451 COG2Q14746 738 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 HSP90AB4PQ58FF6 505 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 LCORLQ8N3X6 602 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 SDR42E1Q8WUS8 393 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 LPAR1Q92633 364 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 MOV10L1Q9BXT6 1211 aaKnown RBP21.3■■□□□ 1
HDAC7-208ENST00000425451 SENP6Q9GZR1 1112 aaPredicted RBP21.3■■□□□ 1
HDAC7-208ENST00000425451 MTMR10Q9NXD2 777 aa21.3■■□□□ 1
HDAC7-208ENST00000425451 RLFQ13129 1914 aa21.29■■□□□ 1
HDAC7-208ENST00000425451 A0A0C4DFX4 3053 aa21.29■■□□□ 1
HDAC7-208ENST00000425451 DNAH12Q6ZR08 3092 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms