RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CPVLQ9H3G5 476 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 BCORQ6W2J9 1755 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 BMP6P22004 513 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 NLRP5P59047 1200 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 PIK3AP1Q6ZUJ8 805 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 DPF2Q92785 391 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 STX8Q9UNK0 236 aa13.26□□□□□ -0.29
UBR4-207ENST00000425413 SERPINC1P01008 464 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 CDC25BP30305 580 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 PLCD1P51178 756 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 TPM4P67936 248 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 RASGRP4Q8TDF6 673 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
UBR4-207ENST00000425413 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
UBR4-207ENST00000425413 TRIM37O94972 964 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 FANCCQ00597 558 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 SPTY2D1Q68D10 685 aaPredicted RBP13.25□□□□□ -0.29
UBR4-207ENST00000425413 OLFM4Q6UX06 510 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 MYRIPQ8NFW9 859 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 TIGD1Q96MW7 591 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 PHF20Q9BVI0 1012 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 KAT14Q9H8E8 782 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 FANCLQ9NW38 375 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 ARPP21Q9UBL0 812 aaPredicted RBP13.25□□□□□ -0.29
UBR4-207ENST00000425413 TUBE1Q9UJT0 475 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 BTAF1O14981 1849 aa13.25□□□□□ -0.29
UBR4-207ENST00000425413 VWA3AA6NCI4 1184 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 F8W031 263 aaPredicted RBP13.24□□□□□ -0.29
UBR4-207ENST00000425413 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 SERPINB2P05120 415 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 GOLGA8HP0CJ92 632 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 TNNT1P13805 278 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 POSTNQ15063 836 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 RCSD1Q6JBY9 416 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 MTA3Q9BTC8 594 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 XDHP47989 1333 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 CNTNAP5Q8WYK1 1306 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 MYH13Q9UKX3 1938 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 LAMB2P55268 1798 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 A0A087X0B3 334 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 MCM7P33993 719 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 CFAP100Q494V2 611 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 ZNF804AQ7Z570 1209 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 WDR66Q8TBY9 1149 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 IL17RBQ9NRM6 502 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
UBR4-207ENST00000425413 NID2Q14112 1375 aa13.24□□□□□ -0.29
UBR4-207ENST00000425413 SMTNL1A8MU46 457 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 ORC4O43929 436 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 COBLO75128 1261 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 GYS1P13807 737 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 CDC25AP30304 524 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 MYL5Q02045 173 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 KLHL10Q6JEL2 608 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 NOL10Q9BSC4 688 aaKnown RBP13.23□□□□□ -0.29
UBR4-207ENST00000425413 MAN1B1Q9UKM7 699 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
UBR4-207ENST00000425413 DUOX1Q9NRD9 1551 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 DDAH1O94760 285 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 CALM1P0DP23 149 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 CALM2P0DP24 149 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 CALM3P0DP25 149 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 HSPA1LP34931 641 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 PNMA1Q8ND90 353 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 HSD3B7Q9H2F3 369 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 TMEM232C9JQI7 657 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 FGRP09769 529 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 SCG2P13521 617 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 RCAN1P53805 252 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 UBASH3AP57075 661 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 CCZ1BP86790 482 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
UBR4-207ENST00000425413 SYMPKQ92797 1274 aaKnown RBP13.23□□□□□ -0.29
UBR4-207ENST00000425413 SMARCE1Q969G3 411 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 CEP131Q9UPN4 1083 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
UBR4-207ENST00000425413 IRS2Q9Y4H2 1338 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 BTDP43251 543 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 FMR1Q06787 632 aaKnown RBP eCLIP13.22□□□□□ -0.295e-7■■■□□ 15.9
UBR4-207ENST00000425413 PTGDRQ13258 359 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 NPY5RQ15761 445 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 TTC38Q5R3I4 469 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 SMYD4Q8IYR2 804 aaPredicted RBP13.22□□□□□ -0.29
UBR4-207ENST00000425413 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
UBR4-207ENST00000425413 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 CD209Q9NNX6 404 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 BAG3O95817 575 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 STX17P56962 302 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
UBR4-207ENST00000425413 ARMCX5Q6P1M9 558 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
UBR4-207ENST00000425413 FAM237AA0A1B0GTK4 181 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms