RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ENAHQ8N8S7 591 aaPredicted RBP12.08□□□□□ -0.48
MDC1-205ENST00000425072 SLC44A5Q8NCS7 719 aa12.08□□□□□ -0.48
MDC1-205ENST00000425072 TRPM4Q8TD43 1214 aa12.08□□□□□ -0.48
MDC1-205ENST00000425072 MAP3K14Q99558 947 aa12.08□□□□□ -0.48
MDC1-205ENST00000425072 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
MDC1-205ENST00000425072 KAT14Q9H8E8 782 aa12.08□□□□□ -0.48
MDC1-205ENST00000425072 IL17RBQ9NRM6 502 aa12.08□□□□□ -0.48
MDC1-205ENST00000425072 SCN4AP35499 1836 aa12.08□□□□□ -0.48
MDC1-205ENST00000425072 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
MDC1-205ENST00000425072 CPLX1O14810 134 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 CDKL5O76039 1030 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 TTLL1O95922 423 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 TOP1P11387 765 aaKnown RBP12.07□□□□□ -0.48
MDC1-205ENST00000425072 STK3Q13188 491 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 COL9A3Q14050 684 aaPredicted RBP12.07□□□□□ -0.48
MDC1-205ENST00000425072 FANCBQ8NB91 859 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 MKL1Q969V6 931 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 TEPSINQ96N21 525 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 MTMR4Q9NYA4 1195 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 BRPF3Q9ULD4 1205 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 MYH8P13535 1937 aa12.07□□□□□ -0.48
MDC1-205ENST00000425072 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
MDC1-205ENST00000425072 AKR1B1P15121 316 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 KIF5BP33176 963 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 NF2P35240 595 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 NOVP48745 357 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 GNAQP50148 359 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 METAP2P50579 478 aaKnown RBP eCLIP12.06□□□□□ -0.48
MDC1-205ENST00000425072 CCT2P78371 535 aaKnown RBP12.06□□□□□ -0.48
MDC1-205ENST00000425072 APOA5Q6Q788 366 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 CDC37L1Q7L3B6 337 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 MIGA2Q7L4E1 593 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 CCDC83Q8IWF9 413 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 NECAB1Q8N987 351 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 GTF3C6Q969F1 213 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 ZNF341Q9BYN7 854 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
MDC1-205ENST00000425072 RBM28Q9NW13 759 aaKnown RBP12.06□□□□□ -0.48
MDC1-205ENST00000425072 GGA3Q9NZ52 723 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
MDC1-205ENST00000425072 GOLGA8BA8MQT2 603 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 POTECB2RU33 542 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
MDC1-205ENST00000425072 DDAH1O94760 285 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 ASNSP08243 561 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 PDCP20941 246 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 CAP2P40123 477 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
MDC1-205ENST00000425072 EAPPQ56P03 285 aaPredicted RBP12.05□□□□□ -0.48
MDC1-205ENST00000425072 NBPF12Q5TAG4 269 aaPredicted RBP12.05□□□□□ -0.48
MDC1-205ENST00000425072 RCSD1Q6JBY9 416 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 KRT26Q7Z3Y9 468 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 USP48Q86UV5 1035 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 CTCFLQ8NI51 663 aaPredicted RBP12.05□□□□□ -0.48
MDC1-205ENST00000425072 NKX2-3Q8TAU0 364 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 NUP133Q8WUM0 1156 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 TMEM47Q9BQJ4 181 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 LZTS2Q9BRK4 669 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 RRAGCQ9HB90 399 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
MDC1-205ENST00000425072 SYNPO2Q9UMS6 1093 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 ASTN2O75129 1339 aaPredicted RBP12.05□□□□□ -0.48
MDC1-205ENST00000425072 PLIN4Q96Q06 1357 aa12.05□□□□□ -0.48
MDC1-205ENST00000425072 DDX60LQ5H9U9 1706 aaKnown RBP12.04□□□□□ -0.48
MDC1-205ENST00000425072 IGKV6D-41A0A0C4DH26 115 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 GOLGA8AA7E2F4 631 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 NMT2O60551 498 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 NUCB2P80303 420 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 SCRN1Q12765 414 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 TROAPQ12815 778 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 MKRN4PQ13434 485 aaPredicted RBP12.04□□□□□ -0.48
MDC1-205ENST00000425072 RTN1Q16799 776 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
MDC1-205ENST00000425072 SH2D4AQ9H788 454 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 ARHGEF10LQ9HCE6 1279 aa12.04□□□□□ -0.48
MDC1-205ENST00000425072 FAM196BA6NMK8 535 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 PHF20L1A8MW92 1017 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 LARGE1O95461 756 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 GH2P01242 217 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 ADD1P35611 737 aaKnown RBP12.03□□□□□ -0.48
MDC1-205ENST00000425072 ATP2B2Q01814 1243 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
MDC1-205ENST00000425072 SSRP1Q08945 709 aaKnown RBP12.03□□□□□ -0.48
MDC1-205ENST00000425072 RAB3GAP1Q15042 981 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 MICU3Q86XE3 530 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 RGS22Q8NE09 1264 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 CHMP5Q9NZZ3 219 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 221.3 ms