RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 MDM2Q00987 491 aaPredicted RBP19.72■□□□□ 0.75
PUDP-203ENST00000424830 USP17L24Q0WX57 530 aa19.72■□□□□ 0.75
PUDP-203ENST00000424830 ZYXQ15942 572 aaKnown RBP19.72■□□□□ 0.75
PUDP-203ENST00000424830 WDR78Q5VTH9 848 aa19.72■□□□□ 0.75
PUDP-203ENST00000424830 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
PUDP-203ENST00000424830 EDC3Q96F86 508 aaKnown RBP19.72■□□□□ 0.75
PUDP-203ENST00000424830 ZNF512BQ96KM6 892 aaPredicted RBP19.72■□□□□ 0.75
PUDP-203ENST00000424830 C12orf42Q96LP6 360 aa19.72■□□□□ 0.75
PUDP-203ENST00000424830 MSCO60682 206 aa19.71■□□□□ 0.75
PUDP-203ENST00000424830 CENPBP07199 599 aaPredicted RBP19.71■□□□□ 0.75
PUDP-203ENST00000424830 USP14P54578 494 aa19.71■□□□□ 0.75
PUDP-203ENST00000424830 LBHD1Q9BQE6 289 aaPredicted RBP19.71■□□□□ 0.75
PUDP-203ENST00000424830 IVNS1ABPQ9Y6Y0 642 aa19.71■□□□□ 0.75
PUDP-203ENST00000424830 CYP7A1P22680 504 aa19.7■□□□□ 0.74
PUDP-203ENST00000424830 ZAP70P43403 619 aa19.7■□□□□ 0.74
PUDP-203ENST00000424830 USP5P45974 858 aa19.7■□□□□ 0.74
PUDP-203ENST00000424830 CLUAP1Q96AJ1 413 aa19.7■□□□□ 0.74
PUDP-203ENST00000424830 PIH1D3Q9NQM4 214 aaKnown RBP19.7■□□□□ 0.74
PUDP-203ENST00000424830 SERPINB13Q9UIV8 391 aa19.7■□□□□ 0.74
PUDP-203ENST00000424830 SLC15A5A6NIM6 579 aa19.69■□□□□ 0.74
PUDP-203ENST00000424830 DYNLL1P63167 89 aaKnown RBP19.69■□□□□ 0.74
PUDP-203ENST00000424830 POLA2Q14181 598 aa19.69■□□□□ 0.74
PUDP-203ENST00000424830 RAB3GAP1Q15042 981 aa19.69■□□□□ 0.74
PUDP-203ENST00000424830 TATDN1Q6P1N9 297 aa19.69■□□□□ 0.74
PUDP-203ENST00000424830 POTEEQ6S8J3 1075 aa19.69■□□□□ 0.74
PUDP-203ENST00000424830 SENP6Q9GZR1 1112 aaPredicted RBP19.69■□□□□ 0.74
PUDP-203ENST00000424830 EHD4Q9H223 541 aa19.69■□□□□ 0.74
PUDP-203ENST00000424830 NDUFB9Q9Y6M9 179 aa19.69■□□□□ 0.74
PUDP-203ENST00000424830 SURF6O75683 361 aaKnown RBP19.68■□□□□ 0.74
PUDP-203ENST00000424830 CNMDO75829 334 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 IDH1O75874 414 aaKnown RBP19.68■□□□□ 0.74
PUDP-203ENST00000424830 VCAM1P19320 739 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 CNGA1P29973 690 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 ATP2B2Q01814 1243 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 CATSPERGQ6ZRH7 1159 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 TTC6Q86TZ1 520 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 MIGA1Q8NAN2 632 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 KIAA1683Q9H0B3 1180 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 PRKAG2Q9UGJ0 569 aa19.68■□□□□ 0.74
PUDP-203ENST00000424830 DDX20Q9UHI6 824 aaKnown RBP19.68■□□□□ 0.74
PUDP-203ENST00000424830 PTPREP23469 700 aa19.67■□□□□ 0.74
PUDP-203ENST00000424830 ABCB5Q2M3G0 1257 aa19.67■□□□□ 0.74
PUDP-203ENST00000424830 CERKLQ49MI3 558 aaPredicted RBP19.67■□□□□ 0.74
PUDP-203ENST00000424830 LBX2Q6XYB7 198 aa19.67■□□□□ 0.74
PUDP-203ENST00000424830 SSH3Q8TE77 659 aa19.67■□□□□ 0.74
PUDP-203ENST00000424830 LPAR1Q92633 364 aa19.67■□□□□ 0.74
PUDP-203ENST00000424830 CABP5Q9NP86 173 aa19.67■□□□□ 0.74
PUDP-203ENST00000424830 FLRT1Q9NZU1 646 aa19.67■□□□□ 0.74
PUDP-203ENST00000424830 TNNQ9UQP3 1299 aa19.67■□□□□ 0.74
PUDP-203ENST00000424830 DNM1LO00429 736 aa19.66■□□□□ 0.74
PUDP-203ENST00000424830 HOXC6P09630 235 aa19.66■□□□□ 0.74
PUDP-203ENST00000424830 GRB14Q14449 540 aa19.66■□□□□ 0.74
PUDP-203ENST00000424830 MAGEB6Q8N7X4 407 aa19.66■□□□□ 0.74
PUDP-203ENST00000424830 DBNLQ9UJU6 430 aaKnown RBP19.66■□□□□ 0.74
PUDP-203ENST00000424830 BCAR3O75815 825 aa19.65■□□□□ 0.74
PUDP-203ENST00000424830 ATN1P54259 1190 aaPredicted RBP19.65■□□□□ 0.74
PUDP-203ENST00000424830 ATP8B2P98198 1209 aa19.65■□□□□ 0.74
PUDP-203ENST00000424830 FAM109BQ6ICB4 259 aaPredicted RBP19.65■□□□□ 0.74
PUDP-203ENST00000424830 TMED8Q6PL24 325 aaPredicted RBP19.65■□□□□ 0.74
PUDP-203ENST00000424830 TMEM57Q8N5G2 664 aa19.65■□□□□ 0.74
PUDP-203ENST00000424830 MAP3K12Q12852 859 aa19.64■□□□□ 0.73
PUDP-203ENST00000424830 ZKSCAN2Q63HK3 967 aa19.64■□□□□ 0.73
PUDP-203ENST00000424830 ACER1Q8TDN7 264 aa19.64■□□□□ 0.73
PUDP-203ENST00000424830 RPAP3Q9H6T3 665 aaPredicted RBP19.64■□□□□ 0.73
PUDP-203ENST00000424830 BTBD7Q9P203 1132 aa19.64■□□□□ 0.73
PUDP-203ENST00000424830 SPDYE16A6NNV3 312 aaPredicted RBP19.63■□□□□ 0.73
PUDP-203ENST00000424830 POTEB2H3BUK9 544 aa19.63■□□□□ 0.73
PUDP-203ENST00000424830 CYP2C19P33261 490 aa19.63■□□□□ 0.73
PUDP-203ENST00000424830 DPP9Q86TI2 863 aa19.63■□□□□ 0.73
PUDP-203ENST00000424830 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.63■□□□□ 0.73
PUDP-203ENST00000424830 CCDC8Q9H0W5 538 aaPredicted RBP19.63■□□□□ 0.73
PUDP-203ENST00000424830 TLR7Q9NYK1 1049 aaKnown RBP19.63■□□□□ 0.73
PUDP-203ENST00000424830 RTP1P59025 263 aa19.62■□□□□ 0.73
PUDP-203ENST00000424830 ZNF697Q5TEC3 545 aa19.62■□□□□ 0.73
PUDP-203ENST00000424830 ARRDC4Q8NCT1 418 aa19.62■□□□□ 0.73
PUDP-203ENST00000424830 NPLOC4Q8TAT6 608 aa19.62■□□□□ 0.73
PUDP-203ENST00000424830 GUCD1Q96NT3 240 aa19.62■□□□□ 0.73
PUDP-203ENST00000424830 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
PUDP-203ENST00000424830 LTBP2Q14767 1821 aa19.62■□□□□ 0.73
PUDP-203ENST00000424830 ZNF236Q9UL36 1845 aa19.62■□□□□ 0.73
PUDP-203ENST00000424830 CYBAP13498 195 aa19.61■□□□□ 0.73
PUDP-203ENST00000424830 SHMT1P34896 483 aa19.61■□□□□ 0.73
PUDP-203ENST00000424830 FAM161BQ96MY7 647 aa19.61■□□□□ 0.73
PUDP-203ENST00000424830 C1orf115Q9H7X2 142 aa19.61■□□□□ 0.73
PUDP-203ENST00000424830 NAV1Q8NEY1 1877 aa19.61■□□□□ 0.73
PUDP-203ENST00000424830 KBTBD13C9JR72 458 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 STRNO43815 780 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 POLR3DP05423 398 aaPredicted RBP19.6■□□□□ 0.73
PUDP-203ENST00000424830 OLFML2BQ68BL8 750 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 TRPV1Q8NER1 839 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 EAF2Q96CJ1 260 aaPredicted RBP19.6■□□□□ 0.73
PUDP-203ENST00000424830 COL25A1Q9BXS0 654 aaPredicted RBP19.6■□□□□ 0.73
PUDP-203ENST00000424830 TANGO6Q9C0B7 1094 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 SLC5A4Q9NY91 659 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 HOXC10Q9NYD6 342 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 ATP11BQ9Y2G3 1177 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 RLFQ13129 1914 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 EYSQ5T1H1 3165 aa19.6■□□□□ 0.73
PUDP-203ENST00000424830 VCANP13611 3396 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms