RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 ECHDC1Q9NTX5 307 aa20.24■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L15C9J2P7 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L13C9JLJ4 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L11C9JVI0 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L18D6R9N7 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L22D6RA61 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L17D6RBQ6 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L19D6RCP7 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L20D6RJB6 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 USP17L24Q0WX57 530 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 DOCK3Q8IZD9 2030 aa20.23■□□□□ 0.83
CCDC78-203ENST00000423653 U2AF1L4Q8WU68 220 aaKnown RBP20.23■□□□□ 0.83
CCDC78-203ENST00000423653 MPHOSPH10O00566 681 aaKnown RBP20.22■□□□□ 0.83
CCDC78-203ENST00000423653 VCAM1P19320 739 aa20.22■□□□□ 0.83
CCDC78-203ENST00000423653 ERVK-9P63128 1117 aa20.22■□□□□ 0.83
CCDC78-203ENST00000423653 ERVK-24P63145 666 aa20.22■□□□□ 0.83
CCDC78-203ENST00000423653 PAGR1Q9BTK6 254 aa20.22■□□□□ 0.83
CCDC78-203ENST00000423653 TXNRD2Q9NNW7 524 aa20.22■□□□□ 0.83
CCDC78-203ENST00000423653 BAZ2AQ9UIF9 1905 aaKnown RBP20.21■□□□□ 0.83
CCDC78-203ENST00000423653 FARP2O94887 1054 aaPredicted RBP20.21■□□□□ 0.83
CCDC78-203ENST00000423653 CCNA1P78396 465 aa20.21■□□□□ 0.83
CCDC78-203ENST00000423653 SEPT2Q15019 361 aa20.21■□□□□ 0.83
CCDC78-203ENST00000423653 TMEM179Q6ZVK1 233 aa20.21■□□□□ 0.83
CCDC78-203ENST00000423653 NUDT12Q9BQG2 462 aa20.21■□□□□ 0.83
CCDC78-203ENST00000423653 HTATIP2Q9BUP3 242 aa20.21■□□□□ 0.83
CCDC78-203ENST00000423653 DCTPP1Q9H773 170 aa20.21■□□□□ 0.83
CCDC78-203ENST00000423653 CWC22Q9HCG8 908 aaKnown RBP20.21■□□□□ 0.83
CCDC78-203ENST00000423653 PAK6Q9NQU5 681 aaPredicted RBP20.21■□□□□ 0.83
CCDC78-203ENST00000423653 PLXNB2O15031 1838 aa20.2■□□□□ 0.82
CCDC78-203ENST00000423653 SGPL1O95470 568 aa20.2■□□□□ 0.82
CCDC78-203ENST00000423653 ACER1Q8TDN7 264 aa20.2■□□□□ 0.82
CCDC78-203ENST00000423653 RBPJLQ9UBG7 517 aa20.2■□□□□ 0.82
CCDC78-203ENST00000423653 GJD2Q9UKL4 321 aa20.2■□□□□ 0.82
CCDC78-203ENST00000423653 RABGAP1Q9Y3P9 1069 aa20.2■□□□□ 0.82
CCDC78-203ENST00000423653 CYP2D6P10635 497 aa20.19■□□□□ 0.82
CCDC78-203ENST00000423653 GUCY1A2P33402 732 aa20.19■□□□□ 0.82
CCDC78-203ENST00000423653 CATSPERGQ6ZRH7 1159 aa20.19■□□□□ 0.82
CCDC78-203ENST00000423653 TRMT44Q8IYL2 757 aaKnown RBP20.19■□□□□ 0.82
CCDC78-203ENST00000423653 DEFB118Q96PH6 123 aa20.19■□□□□ 0.82
CCDC78-203ENST00000423653 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCDC78-203ENST00000423653 SH2D4AQ9H788 454 aa20.19■□□□□ 0.82
CCDC78-203ENST00000423653 SLC4A4Q9Y6R1 1079 aa20.19■□□□□ 0.82
CCDC78-203ENST00000423653 PRKAB2O43741 272 aa20.18■□□□□ 0.82
CCDC78-203ENST00000423653 XRCC5P13010 732 aaKnown RBP20.18■□□□□ 0.82
CCDC78-203ENST00000423653 LRRFIP1Q32MZ4 808 aaKnown RBP20.18■□□□□ 0.82
CCDC78-203ENST00000423653 SLFNL1Q499Z3 407 aa20.18■□□□□ 0.82
CCDC78-203ENST00000423653 LBX2Q6XYB7 198 aa20.18■□□□□ 0.82
CCDC78-203ENST00000423653 UBE2Q1Q7Z7E8 422 aa20.18■□□□□ 0.82
CCDC78-203ENST00000423653 KBTBD3Q8NAB2 608 aa20.18■□□□□ 0.82
CCDC78-203ENST00000423653 SLC44A5Q8NCS7 719 aa20.18■□□□□ 0.82
CCDC78-203ENST00000423653 CCDC17Q96LX7 622 aa20.18■□□□□ 0.82
CCDC78-203ENST00000423653 RPAP3Q9H6T3 665 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-203ENST00000423653 ARHGEF10LQ9HCE6 1279 aa20.18■□□□□ 0.82
CCDC78-203ENST00000423653 ARPP21Q9UBL0 812 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-203ENST00000423653 GLRX3O76003 335 aaKnown RBP20.17■□□□□ 0.82
CCDC78-203ENST00000423653 TFRCP02786 760 aaKnown RBP20.17■□□□□ 0.82
CCDC78-203ENST00000423653 ZFYP08048 801 aaPredicted RBP20.17■□□□□ 0.82
CCDC78-203ENST00000423653 ZKSCAN1P17029 563 aaPredicted RBP20.17■□□□□ 0.82
CCDC78-203ENST00000423653 RRP1P56182 461 aaKnown RBP20.17■□□□□ 0.82
CCDC78-203ENST00000423653 EVX2Q03828 476 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 ICA1Q05084 483 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 C12orf60Q5U649 245 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 GPR142Q7Z601 462 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 PLEKHH3Q7Z736 793 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 LPAR1Q92633 364 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 DYNLL2Q96FJ2 89 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 APBA2Q99767 749 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 PORCNQ9H237 461 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 HMX1Q9NP08 348 aaPredicted RBP20.17■□□□□ 0.82
CCDC78-203ENST00000423653 RPTORQ8N122 1335 aa20.17■□□□□ 0.82
CCDC78-203ENST00000423653 USP17L12C9JPN9 530 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 USP17L21D6R901 530 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 ERC2O15083 957 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 PEX10O60683 326 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 CYP2B6P20813 491 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 RGS2P41220 211 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 C16orf86Q6ZW13 317 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 TRIB2Q92519 343 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 DPF3Q92784 378 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 TANGO6Q9C0B7 1094 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 PUS7LQ9H0K6 701 aaKnown RBP20.16■□□□□ 0.82
CCDC78-203ENST00000423653 TTC41PQ6P2S7 1318 aa20.16■□□□□ 0.82
CCDC78-203ENST00000423653 SPDYE16A6NNV3 312 aaPredicted RBP20.15■□□□□ 0.82
CCDC78-203ENST00000423653 APPBP2Q92624 585 aa20.15■□□□□ 0.82
CCDC78-203ENST00000423653 CRISPLD2Q9H0B8 497 aa20.15■□□□□ 0.82
CCDC78-203ENST00000423653 IVNS1ABPQ9Y6Y0 642 aa20.15■□□□□ 0.82
CCDC78-203ENST00000423653 A0A0G2JMZ2 1700 aa20.15■□□□□ 0.82
CCDC78-203ENST00000423653 CHGBP05060 677 aa20.14■□□□□ 0.81
CCDC78-203ENST00000423653 PRKAR2AP13861 404 aaKnown RBP20.14■□□□□ 0.81
CCDC78-203ENST00000423653 AKR1B1P15121 316 aa20.14■□□□□ 0.81
CCDC78-203ENST00000423653 CDK8P49336 464 aa20.14■□□□□ 0.81
CCDC78-203ENST00000423653 Q3C1V9 767 aa20.14■□□□□ 0.81
CCDC78-203ENST00000423653 MORN1Q5T089 497 aa20.14■□□□□ 0.81
CCDC78-203ENST00000423653 WDR78Q5VTH9 848 aa20.14■□□□□ 0.81
CCDC78-203ENST00000423653 TSHZ3Q63HK5 1081 aa20.14■□□□□ 0.81
CCDC78-203ENST00000423653 GIMAP6Q6P9H5 292 aa20.14■□□□□ 0.81
CCDC78-203ENST00000423653 ZBTB47Q9UFB7 747 aaPredicted RBP20.14■□□□□ 0.81
CCDC78-203ENST00000423653 CYP2D7A0A087X1C5 515 aa20.13■□□□□ 0.81
CCDC78-203ENST00000423653 A0A1W2PRG0 241 aa20.13■□□□□ 0.81
CCDC78-203ENST00000423653 CNMDO75829 334 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms