RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
PTPRN-204ENST00000423636 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
PTPRN-204ENST00000423636 FRMPD2Q68DX3 1309 aaPredicted RBP13.68□□□□□ -0.22
PTPRN-204ENST00000423636 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
PTPRN-204ENST00000423636 RASSF8Q8NHQ8 419 aa13.68□□□□□ -0.22
PTPRN-204ENST00000423636 GJA10Q969M2 543 aa13.68□□□□□ -0.22
PTPRN-204ENST00000423636 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
PTPRN-204ENST00000423636 CTAGE5O15320 804 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 TSPY3P0CV98 308 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 TSPY8P0CW00 308 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 PTGDRQ13258 359 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 MFSD14BQ5SR56 506 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 KRBA2Q6ZNG9 492 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 SYMPKQ92797 1274 aaKnown RBP13.67□□□□□ -0.22
PTPRN-204ENST00000423636 NYXQ9GZU5 481 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 POLLQ9UGP5 575 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 CICQ96RK0 1608 aaPredicted RBP13.67□□□□□ -0.22
PTPRN-204ENST00000423636 A0A1W2PQ27 194 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 A0A1W2PQ64 194 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 A0A1W2PQD8 194 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
PTPRN-204ENST00000423636 FANCCQ00597 558 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 NCAPHQ15003 741 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 BTDP43251 543 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 ADKP55263 362 aaKnown RBP13.67□□□□□ -0.22
PTPRN-204ENST00000423636 NLRP12P59046 1061 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 TCP10Q12799 353 aa13.67□□□□□ -0.22
PTPRN-204ENST00000423636 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
PTPRN-204ENST00000423636 FBXO2Q9UK22 296 aaPredicted RBP13.67□□□□□ -0.22
PTPRN-204ENST00000423636 UBASH3AP57075 661 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 FBXL16Q8N461 479 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 KAT14Q9H8E8 782 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 DDX60Q8IY21 1712 aaKnown RBP13.66□□□□□ -0.22
PTPRN-204ENST00000423636 PES1O00541 588 aaKnown RBP13.66□□□□□ -0.22
PTPRN-204ENST00000423636 RESP18Q5W5W9 173 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 PNMA1Q8ND90 353 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 FAM205AQ6ZU69 1335 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 ATRNO75882 1429 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 GYS1P13807 737 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 TAL1P17542 331 aaPredicted RBP13.66□□□□□ -0.22
PTPRN-204ENST00000423636 LRRC47Q8N1G4 583 aaKnown RBP13.66□□□□□ -0.22
PTPRN-204ENST00000423636 HSD3B7Q9H2F3 369 aa13.66□□□□□ -0.22
PTPRN-204ENST00000423636 TRIM75PA6NK02 468 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 IGSF3O75054 1194 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 KRT2P35908 639 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 DDR1Q08345 913 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 RCSD1Q6JBY9 416 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 JMYQ8N9B5 988 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 MAN1B1Q9UKM7 699 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 POSTNQ15063 836 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 INF2Q27J81 1249 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 SLC35G1Q2M3R5 365 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 TEX11Q8IYF3 940 aa13.65□□□□□ -0.22
PTPRN-204ENST00000423636 ZNF444Q8N0Y2 327 aaPredicted RBP13.65□□□□□ -0.22
PTPRN-204ENST00000423636 CCDC196A0A1B0GTZ2 297 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 TPM2P07951 284 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 ZNF622Q969S3 477 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTPRN-204ENST00000423636 DBNDD1Q9H9R9 158 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 NFE2L3Q9Y4A8 694 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 SNAP25P60880 206 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 FUT2Q10981 343 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 GRAPQ13588 217 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 GRAPLQ8TC17 118 aaPredicted RBP13.64□□□□□ -0.23
PTPRN-204ENST00000423636 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 KARSQ15046 597 aaKnown RBP13.64□□□□□ -0.23
PTPRN-204ENST00000423636 ZNF710Q8N1W2 664 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 LRRN4CLQ8ND94 238 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 DESI2Q9BSY9 194 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 HPSEQ9Y251 543 aa13.64□□□□□ -0.23
PTPRN-204ENST00000423636 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 A0A0U1RQJ8 604 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 CCT6AP40227 531 aaKnown RBP13.63□□□□□ -0.23
PTPRN-204ENST00000423636 ATRIPQ8WXE1 791 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 MED15Q96RN5 788 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 G3V3G9 751 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 MPHOSPH10O00566 681 aaKnown RBP13.63□□□□□ -0.23
PTPRN-204ENST00000423636 CUTAO60888 179 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
PTPRN-204ENST00000423636 SLC16A2P36021 539 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 CCZ1BP86790 482 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 CCZ1P86791 482 aaPredicted RBP13.63□□□□□ -0.23
PTPRN-204ENST00000423636 IL17AQ16552 155 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 SLC10A5Q5PT55 438 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 WASF1Q92558 559 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 ANKRD2Q9GZV1 360 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
PTPRN-204ENST00000423636 FAM170AA1A519 330 aa13.62□□□□□ -0.23
PTPRN-204ENST00000423636 TULP1O00294 542 aaPredicted RBP13.62□□□□□ -0.23
PTPRN-204ENST00000423636 CYTH3O43739 400 aa13.62□□□□□ -0.23
PTPRN-204ENST00000423636 RBM5P52756 815 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTPRN-204ENST00000423636 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
PTPRN-204ENST00000423636 JAKMIP3Q5VZ66 844 aa13.62□□□□□ -0.23
PTPRN-204ENST00000423636 ATL3Q6DD88 541 aa13.62□□□□□ -0.23
PTPRN-204ENST00000423636 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
PTPRN-204ENST00000423636 TEX33O43247 280 aa13.62□□□□□ -0.23
PTPRN-204ENST00000423636 PTPREP23469 700 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms