RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 CTR9Q6PD62 1173 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 PLEKHM2Q8IWE5 1019 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 NAV1Q8NEY1 1877 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 DYNLL2Q96FJ2 89 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 CPA4Q9UI42 421 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 MYH1P12882 1939 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
USP49-204ENST00000423567 CYP2D7A0A087X1C5 515 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 PATL2C9JE40 543 aaKnown RBP13.08□□□□□ -0.32
USP49-204ENST00000423567 CYP2C8P10632 490 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 JAG1P78504 1218 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.32
USP49-204ENST00000423567 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 CCDC17Q96LX7 622 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
USP49-204ENST00000423567 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
USP49-204ENST00000423567 MYH7P12883 1935 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 CCDC85CA6NKD9 419 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 SLC3A2P08195 630 aaKnown RBP13.07□□□□□ -0.32
USP49-204ENST00000423567 CDK8P49336 464 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 IRX3P78415 501 aaPredicted RBP13.07□□□□□ -0.32
USP49-204ENST00000423567 SHROOM1Q2M3G4 852 aaPredicted RBP13.07□□□□□ -0.32
USP49-204ENST00000423567 SBK1Q52WX2 424 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 C17orf99Q6UX52 265 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 C16orf86Q6ZW13 317 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 OTOP1Q7RTM1 612 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 SLC44A5Q8NCS7 719 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 NAPBQ9H115 298 aa13.07□□□□□ -0.32
USP49-204ENST00000423567 DDX60LQ5H9U9 1706 aaKnown RBP13.07□□□□□ -0.32
USP49-204ENST00000423567 GNRH1P01148 92 aa13.06□□□□□ -0.32
USP49-204ENST00000423567 GCLCP48506 637 aaPredicted RBP13.06□□□□□ -0.32
USP49-204ENST00000423567 LACTBP83111 547 aaPredicted RBP13.06□□□□□ -0.32
USP49-204ENST00000423567 SEPT2Q15019 361 aa13.06□□□□□ -0.32
USP49-204ENST00000423567 IFNL3Q8IZI9 196 aa13.06□□□□□ -0.32
USP49-204ENST00000423567 SH2D4AQ9H788 454 aa13.06□□□□□ -0.32
USP49-204ENST00000423567 MKNK2Q9HBH9 465 aa13.06□□□□□ -0.32
USP49-204ENST00000423567 ADGRA2Q96PE1 1338 aa13.06□□□□□ -0.32
USP49-204ENST00000423567 HIP1O00291 1037 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 BCRP11274 1271 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 AKR1B1P15121 316 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 HOXD10P28358 340 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
USP49-204ENST00000423567 ICA1Q05084 483 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
USP49-204ENST00000423567 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
USP49-204ENST00000423567 KIAA1683Q9H0B3 1180 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 ASCC2Q9H1I8 757 aaPredicted RBP13.05□□□□□ -0.32
USP49-204ENST00000423567 ARHGEF10LQ9HCE6 1279 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 EPB41L4AQ9HCS5 686 aaPredicted RBP13.05□□□□□ -0.32
USP49-204ENST00000423567 DIAPH3Q9NSV4 1193 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
USP49-204ENST00000423567 ATAD5Q96QE3 1844 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
USP49-204ENST00000423567 HOXA7P31268 230 aaPredicted RBP13.04□□□□□ -0.32
USP49-204ENST00000423567 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 PSMC4P43686 418 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 PRMT2P55345 433 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 FCGRTP55899 365 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 PDE4BQ07343 736 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
USP49-204ENST00000423567 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 STK11IPQ8N1F8 1099 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 GTF3C2Q8WUA4 911 aaPredicted RBP13.04□□□□□ -0.32
USP49-204ENST00000423567 C12orf42Q96LP6 360 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 EMILIN3Q9NT22 766 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 PTPN22Q9Y2R2 807 aa13.04□□□□□ -0.32
USP49-204ENST00000423567 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 MAP3K13O43283 966 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 ECM2O94769 699 aaPredicted RBP13.03□□□□□ -0.32
USP49-204ENST00000423567 NEFLP07196 543 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 SDSP20132 328 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 ATP2B2Q01814 1243 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 PPARAQ07869 468 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 FAM110CQ1W6H9 321 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 ZNF444Q8N0Y2 327 aaPredicted RBP13.03□□□□□ -0.32
USP49-204ENST00000423567 ANKRD13CQ8N6S4 541 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 ACER1Q8TDN7 264 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
USP49-204ENST00000423567 ARHGAP39Q9C0H5 1083 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms