RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 ZNF574Q6ZN55 896 aaPredicted RBP8.22□□□□□ -1.09
LINC00458-201ENST00000423442 AGBL5Q8NDL9 886 aa8.22□□□□□ -1.09
LINC00458-201ENST00000423442 CORO1BQ9BR76 489 aa8.22□□□□□ -1.09
LINC00458-201ENST00000423442 GSX1Q9H4S2 264 aaPredicted RBP8.22□□□□□ -1.09
LINC00458-201ENST00000423442 DAGLAQ9Y4D2 1042 aa8.22□□□□□ -1.09
LINC00458-201ENST00000423442 COL22A1Q8NFW1 1626 aaPredicted RBP8.21□□□□□ -1.09
LINC00458-201ENST00000423442 HFM1A2PYH4 1435 aa8.21□□□□□ -1.09
LINC00458-201ENST00000423442 MARF1Q9Y4F3 1742 aaKnown RBP8.21□□□□□ -1.09
LINC00458-201ENST00000423442 B3GALT4O96024 378 aa8.21□□□□□ -1.1
LINC00458-201ENST00000423442 C8AP07357 584 aa8.21□□□□□ -1.1
LINC00458-201ENST00000423442 JUNBP17275 347 aaPredicted RBP8.21□□□□□ -1.1
LINC00458-201ENST00000423442 HP1BP3Q5SSJ5 553 aaPredicted RBP8.21□□□□□ -1.1
LINC00458-201ENST00000423442 CCDC82Q8N4S0 544 aa8.21□□□□□ -1.1
LINC00458-201ENST00000423442 POU5F2Q8N7G0 328 aa8.21□□□□□ -1.1
LINC00458-201ENST00000423442 BRWD3Q6RI45 1802 aa8.21□□□□□ -1.1
LINC00458-201ENST00000423442 KIF1BO60333 1816 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 GLI3P10071 1580 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 AOC2O75106 756 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 BCL7CQ8WUZ0 217 aaPredicted RBP8.2□□□□□ -1.1
LINC00458-201ENST00000423442 MPHOSPH9Q99550 1183 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 WDR18Q9BV38 432 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 KRTAP4-9Q9BYQ8 210 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 ZNF576Q9H609 170 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 ZFYVE1Q9HBF4 777 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 PPP1R9AQ9ULJ8 1098 aa8.2□□□□□ -1.1
LINC00458-201ENST00000423442 MYOM2P54296 1465 aa8.19□□□□□ -1.1
LINC00458-201ENST00000423442 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
LINC00458-201ENST00000423442 KIAA0319Q5VV43 1072 aa8.19□□□□□ -1.1
LINC00458-201ENST00000423442 OGFOD3Q6PK18 319 aa8.19□□□□□ -1.1
LINC00458-201ENST00000423442 SPRED2Q7Z698 418 aa8.19□□□□□ -1.1
LINC00458-201ENST00000423442 WFDC3Q8IUB2 231 aa8.19□□□□□ -1.1
LINC00458-201ENST00000423442 SLC5A6Q9Y289 635 aa8.19□□□□□ -1.1
LINC00458-201ENST00000423442 RALGAPBQ86X10 1494 aa8.19□□□□□ -1.1
LINC00458-201ENST00000423442 SPHKAPQ2M3C7 1700 aa8.18□□□□□ -1.1
LINC00458-201ENST00000423442 PAPLNO95428 1278 aa8.18□□□□□ -1.1
LINC00458-201ENST00000423442 DDX54Q8TDD1 881 aaKnown RBP8.18□□□□□ -1.1
LINC00458-201ENST00000423442 EHD4Q9H223 541 aa8.18□□□□□ -1.1
LINC00458-201ENST00000423442 RPGRIP1LQ68CZ1 1315 aa8.18□□□□□ -1.1
LINC00458-201ENST00000423442 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.17□□□□□ -1.1
LINC00458-201ENST00000423442 ITPKAP23677 461 aa8.17□□□□□ -1.1
LINC00458-201ENST00000423442 XPCQ01831 940 aaPredicted RBP8.17□□□□□ -1.1
LINC00458-201ENST00000423442 BNIP3Q12983 259 aa8.17□□□□□ -1.1
LINC00458-201ENST00000423442 ORC1Q13415 861 aa8.17□□□□□ -1.1
LINC00458-201ENST00000423442 PLCL1Q15111 1095 aa8.17□□□□□ -1.1
LINC00458-201ENST00000423442 RGL3Q3MIN7 710 aa8.17□□□□□ -1.1
LINC00458-201ENST00000423442 UNC5CLQ8IV45 518 aa8.17□□□□□ -1.1
LINC00458-201ENST00000423442 WDR89Q96FK6 387 aaPredicted RBP8.17□□□□□ -1.1
LINC00458-201ENST00000423442 NPHS2Q9NP85 383 aa8.17□□□□□ -1.1
LINC00458-201ENST00000423442 ICMTO60725 284 aa8.16□□□□□ -1.1
LINC00458-201ENST00000423442 LIG1P18858 919 aa8.16□□□□□ -1.1
LINC00458-201ENST00000423442 CDK5R2Q13319 367 aa8.16□□□□□ -1.1
LINC00458-201ENST00000423442 ECM1Q16610 540 aa8.16□□□□□ -1.1
LINC00458-201ENST00000423442 ZNF792Q3KQV3 632 aa8.16□□□□□ -1.1
LINC00458-201ENST00000423442 ROBO2Q9HCK4 1378 aa8.16□□□□□ -1.1
LINC00458-201ENST00000423442 BRPF3Q9ULD4 1205 aa8.16□□□□□ -1.1
LINC00458-201ENST00000423442 SLIT2O94813 1529 aa8.15□□□□□ -1.1
LINC00458-201ENST00000423442 PXDNQ92626 1479 aa8.15□□□□□ -1.1
LINC00458-201ENST00000423442 NPHP3Q7Z494 1330 aa8.15□□□□□ -1.1
LINC00458-201ENST00000423442 TMPRSS2O15393 492 aa8.15□□□□□ -1.1
LINC00458-201ENST00000423442 ZNF157P51786 506 aaPredicted RBP8.15□□□□□ -1.1
LINC00458-201ENST00000423442 KRT27Q7Z3Y8 459 aa8.15□□□□□ -1.1
LINC00458-201ENST00000423442 PLD6Q8N2A8 252 aaKnown RBP8.15□□□□□ -1.1
LINC00458-201ENST00000423442 FAM181AQ8N9Y4 354 aa8.15□□□□□ -1.1
LINC00458-201ENST00000423442 ZC3H12CQ9C0D7 883 aaKnown RBP8.15□□□□□ -1.1
LINC00458-201ENST00000423442 NEXMIFQ5QGS0 1516 aa8.14□□□□□ -1.11
LINC00458-201ENST00000423442 YY1P25490 414 aa8.14□□□□□ -1.11
LINC00458-201ENST00000423442 CCDC86Q9H6F5 360 aaKnown RBP8.14□□□□□ -1.11
LINC00458-201ENST00000423442 ABCB6Q9NP58 842 aa8.14□□□□□ -1.11
LINC00458-201ENST00000423442 CCDC144AA2RUR9 1427 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 H3BRB1 525 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 FAM87AP0C7U9 286 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 SERPINB4P48594 390 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 AP3B2Q13367 1082 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 R3HDM1Q15032 1099 aaKnown RBP8.13□□□□□ -1.11
LINC00458-201ENST00000423442 CYP27C1Q4G0S4 372 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 ZNF648Q5T619 568 aaPredicted RBP8.13□□□□□ -1.11
LINC00458-201ENST00000423442 STK11IPQ8N1F8 1099 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 TUT1Q9H6E5 874 aaKnown RBP8.13□□□□□ -1.11
LINC00458-201ENST00000423442 CRIM1Q9NZV1 1036 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 CCDC9Q9Y3X0 531 aaKnown RBP8.13□□□□□ -1.11
LINC00458-201ENST00000423442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.13□□□□□ -1.11
LINC00458-201ENST00000423442 U3KQE9 123 aa8.13□□□□□ -1.11
LINC00458-201ENST00000423442 SYNGAP1Q96PV0 1343 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 CPNE3O75131 537 aaKnown RBP8.12□□□□□ -1.11
LINC00458-201ENST00000423442 NEFLP07196 543 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 CD96P40200 585 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 ARHGAP4P98171 946 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 VPS72Q15906 364 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 GLYCTKQ8IVS8 523 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 FANCD2OSQ96PS1 177 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 EGFL7Q9UHF1 273 aa8.12□□□□□ -1.11
LINC00458-201ENST00000423442 RAB3GAP2Q9H2M9 1393 aa8.11□□□□□ -1.11
LINC00458-201ENST00000423442 CLTCL1P53675 1640 aa8.11□□□□□ -1.11
LINC00458-201ENST00000423442 USP32Q8NFA0 1604 aa8.11□□□□□ -1.11
LINC00458-201ENST00000423442 ZNF862O60290 1169 aa8.11□□□□□ -1.11
LINC00458-201ENST00000423442 CD8BP10966 210 aa8.11□□□□□ -1.11
LINC00458-201ENST00000423442 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
LINC00458-201ENST00000423442 C1orf115Q9H7X2 142 aa8.11□□□□□ -1.11
LINC00458-201ENST00000423442 PIDD1Q9HB75 910 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms