RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 IQCEQ6IPM2 695 aa17.04■□□□□ 0.32
SHISA9-201ENST00000423335 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.04■□□□□ 0.32
SHISA9-201ENST00000423335 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
SHISA9-201ENST00000423335 PAFAH1B1P43034 410 aa17.03■□□□□ 0.32
SHISA9-201ENST00000423335 CNKSR1Q969H4 720 aa17.03■□□□□ 0.32
SHISA9-201ENST00000423335 AIFM3Q96NN9 605 aa17.03■□□□□ 0.32
SHISA9-201ENST00000423335 UBXN1Q04323 297 aa17.03■□□□□ 0.32
SHISA9-201ENST00000423335 ZMYM1Q5SVZ6 1142 aa17.03■□□□□ 0.32
SHISA9-201ENST00000423335 VPS54Q9P1Q0 977 aa17.03■□□□□ 0.32
SHISA9-201ENST00000423335 AKR1B15C9JRZ8 316 aaPredicted RBP17.03■□□□□ 0.32
SHISA9-201ENST00000423335 LRRC47Q8N1G4 583 aaKnown RBP17.03■□□□□ 0.32
SHISA9-201ENST00000423335 DSCC1Q9BVC3 393 aa17.03■□□□□ 0.32
SHISA9-201ENST00000423335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.03■□□□□ 0.32
SHISA9-201ENST00000423335 SIGLEC1Q9BZZ2 1709 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 PPARDQ03181 441 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 EEF2KMTQ96G04 330 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 USO1O60763 962 aaKnown RBP17.02■□□□□ 0.32
SHISA9-201ENST00000423335 USP17L8P0C7I0 530 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.32
SHISA9-201ENST00000423335 HLTFQ14527 1009 aaKnown RBP eCLIP17.02■□□□□ 0.32
SHISA9-201ENST00000423335 TAX1BP1Q86VP1 789 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 FBXO18Q8NFZ0 1043 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 DYNLL2Q96FJ2 89 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 GDAP1L1Q96MZ0 367 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.32
SHISA9-201ENST00000423335 BTBD18B2RXH4 712 aa17.02■□□□□ 0.31
SHISA9-201ENST00000423335 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.31
SHISA9-201ENST00000423335 LETM2Q2VYF4 491 aa17.02■□□□□ 0.31
SHISA9-201ENST00000423335 EAPPQ56P03 285 aaPredicted RBP17.02■□□□□ 0.31
SHISA9-201ENST00000423335 RABEP2Q9H5N1 569 aa17.02■□□□□ 0.31
SHISA9-201ENST00000423335 ETF1P62495 437 aaKnown RBP17.01■□□□□ 0.31
SHISA9-201ENST00000423335 TAF4BQ92750 862 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 BCCIPQ9P287 314 aaKnown RBP eCLIP17.01■□□□□ 0.31
SHISA9-201ENST00000423335 COBLO75128 1261 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 BBOX1O75936 387 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 PARP1P09874 1014 aaKnown RBP17.01■□□□□ 0.31
SHISA9-201ENST00000423335 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 TMEM87AQ8NBN3 555 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 ZNF274Q96GC6 653 aaPredicted RBP17.01■□□□□ 0.31
SHISA9-201ENST00000423335 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 IMPACTQ9P2X3 320 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 SERTAD1Q9UHV2 236 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 RDXP35241 583 aaKnown RBP17.01■□□□□ 0.31
SHISA9-201ENST00000423335 GRAPQ13588 217 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 USH1GQ495M9 461 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
SHISA9-201ENST00000423335 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 CTAGE1Q96RT6 745 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 PXDNQ92626 1479 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 TNKSO95271 1327 aa17.01■□□□□ 0.31
SHISA9-201ENST00000423335 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
SHISA9-201ENST00000423335 CALM1P0DP23 149 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 CALM2P0DP24 149 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 CALM3P0DP25 149 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 GNAQP50148 359 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 ARID5AQ03989 594 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 RESTQ13127 1097 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 TXLNBQ8N3L3 684 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 TAF6LQ9Y6J9 622 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 ARHGAP23Q9P227 1491 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 ARHGAP6O43182 974 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 ATP1A3P13637 1013 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 SLC1A4P43007 532 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 SPICE1Q8N0Z3 855 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
SHISA9-201ENST00000423335 TMEM87BQ96K49 555 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 MMRN2Q9H8L6 949 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 PCDHA5Q9Y5H7 936 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 OVOS2A0A0G2JMS6 1433 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 ATP10DQ9P241 1426 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 KIAA1210Q9ULL0 1709 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 FAM196BA6NMK8 535 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 CAMTA2O94983 1202 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 ADD2P35612 726 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 BSDC1Q9NW68 430 aaPredicted RBP17■□□□□ 0.31
SHISA9-201ENST00000423335 FBXO3Q9UK99 471 aa17■□□□□ 0.31
SHISA9-201ENST00000423335 POSTNQ15063 836 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 TMEM266Q2M3C6 531 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 RILPL1Q5EBL4 403 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 PIK3AP1Q6ZUJ8 805 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 ZNF654Q8IZM8 581 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 RRP36Q96EU6 259 aaKnown RBP16.99■□□□□ 0.31
SHISA9-201ENST00000423335 HINFPQ9BQA5 517 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 RCOR1Q9UKL0 485 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
SHISA9-201ENST00000423335 SPATA31A6Q5VVP1 1343 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 KRBA2Q6ZNG9 492 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 ATG9AQ7Z3C6 839 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 SMARCC2Q8TAQ2 1214 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 CTNND2Q9UQB3 1225 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 ASIC1P78348 528 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 FRMPD2Q68DX3 1309 aaPredicted RBP16.99■□□□□ 0.31
SHISA9-201ENST00000423335 SHTN1A0MZ66 631 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 POTEB2H3BUK9 544 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 MECOMQ03112 1051 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 GABPB1Q06547 395 aaPredicted RBP16.99■□□□□ 0.31
SHISA9-201ENST00000423335 UBE3CQ15386 1083 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 TCERG1LQ5VWI1 586 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms