RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 MPHOSPH10O00566 681 aaKnown RBP16.49■□□□□ 0.23
SEC23B-205ENST00000422877 TLR2O60603 784 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 GUCY1A2P33402 732 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 USP14P54578 494 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 HMGCS2P54868 508 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 PDE4BQ07343 736 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 PABPC4Q13310 644 aaKnown RBP eCLIP16.49■□□□□ 0.23
SEC23B-205ENST00000422877 MTMR2Q13614 643 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 COL13A1Q5TAT6 717 aaPredicted RBP16.49■□□□□ 0.23
SEC23B-205ENST00000422877 RUFY2Q8WXA3 655 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 C12orf42Q96LP6 360 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 PARK7Q99497 189 aaKnown RBP16.49■□□□□ 0.23
SEC23B-205ENST00000422877 KIAA1683Q9H0B3 1180 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 MKNK2Q9HBH9 465 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 PNMA3Q9UL41 463 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
SEC23B-205ENST00000422877 ADGRA2Q96PE1 1338 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 A0A0G2JMZ2 1700 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 COL11A1P12107 1806 aaPredicted RBP16.48■□□□□ 0.23
SEC23B-205ENST00000422877 FKTNO75072 461 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 FGAP02671 866 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 AKR1B1P15121 316 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 RASA1P20936 1047 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 CHMLP26374 656 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 SEPT2Q15019 361 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 USP17L2Q6R6M4 530 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 ZNF296Q8WUU4 475 aaPredicted RBP16.48■□□□□ 0.23
SEC23B-205ENST00000422877 DSCC1Q9BVC3 393 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 R3HDMLQ9H3Y0 253 aa16.48■□□□□ 0.23
SEC23B-205ENST00000422877 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
SEC23B-205ENST00000422877 HOXA7P31268 230 aaPredicted RBP16.47■□□□□ 0.23
SEC23B-205ENST00000422877 NT5C2P49902 561 aa16.47■□□□□ 0.23
SEC23B-205ENST00000422877 FEZ1Q99689 392 aa16.47■□□□□ 0.23
SEC23B-205ENST00000422877 SH2D4AQ9H788 454 aa16.47■□□□□ 0.23
SEC23B-205ENST00000422877 KANSL2Q9H9L4 492 aa16.47■□□□□ 0.23
SEC23B-205ENST00000422877 ARHGEF10LQ9HCE6 1279 aa16.47■□□□□ 0.23
SEC23B-205ENST00000422877 FGRP09769 529 aa16.46■□□□□ 0.23
SEC23B-205ENST00000422877 ICA1Q05084 483 aa16.46■□□□□ 0.23
SEC23B-205ENST00000422877 TREML2Q5T2D2 321 aa16.46■□□□□ 0.23
SEC23B-205ENST00000422877 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
SEC23B-205ENST00000422877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
SEC23B-205ENST00000422877 SP3Q02447 781 aa16.45■□□□□ 0.22
SEC23B-205ENST00000422877 C17orf99Q6UX52 265 aa16.45■□□□□ 0.22
SEC23B-205ENST00000422877 ACER1Q8TDN7 264 aa16.45■□□□□ 0.22
SEC23B-205ENST00000422877 ERO1AQ96HE7 468 aa16.45■□□□□ 0.22
SEC23B-205ENST00000422877 EMILIN3Q9NT22 766 aa16.45■□□□□ 0.22
SEC23B-205ENST00000422877 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
SEC23B-205ENST00000422877 IGKV6D-41A0A0C4DH26 115 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 SGSM2O43147 1006 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 ORC4O43929 436 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 OSBPP22059 807 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 PPP4R3BQ5MIZ7 849 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 LPAR1Q92633 364 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
SEC23B-205ENST00000422877 IL25Q9H293 177 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 SYNPO2Q9UMS6 1093 aa16.44■□□□□ 0.22
SEC23B-205ENST00000422877 A0A1W2PRG0 241 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 CYP2C8P10632 490 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 BCRP11274 1271 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
SEC23B-205ENST00000422877 CTDSPL2Q05D32 466 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 DGKZQ13574 1117 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 CTU1Q7Z7A3 348 aaKnown RBP16.43■□□□□ 0.22
SEC23B-205ENST00000422877 SIAH1Q8IUQ4 282 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 TNS4Q8IZW8 715 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 NEDD1Q8NHV4 660 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 SMCR8Q8TEV9 937 aaPredicted RBP16.43■□□□□ 0.22
SEC23B-205ENST00000422877 GTF3C2Q8WUA4 911 aaPredicted RBP16.43■□□□□ 0.22
SEC23B-205ENST00000422877 RNF41Q9H4P4 317 aaPredicted RBP16.43■□□□□ 0.22
SEC23B-205ENST00000422877 NYAP2Q9P242 653 aa16.43■□□□□ 0.22
SEC23B-205ENST00000422877 ZNF213O14771 459 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 PRDM1O75626 825 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 TSPY3P0CV98 308 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 TSPY8P0CW00 308 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 VCAM1P19320 739 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 IRX3P78415 501 aaPredicted RBP16.42■□□□□ 0.22
SEC23B-205ENST00000422877 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 PKN2Q16513 984 aaKnown RBP16.42■□□□□ 0.22
SEC23B-205ENST00000422877 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 STAG1Q8WVM7 1258 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
SEC23B-205ENST00000422877 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
SEC23B-205ENST00000422877 HTTP42858 3142 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 ZNFX1Q9P2E3 1918 aaKnown RBP16.41■□□□□ 0.22
SEC23B-205ENST00000422877 PLXNB2O15031 1838 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 GNRH1P01148 92 aa16.41■□□□□ 0.22
SEC23B-205ENST00000422877 EEF2P13639 858 aaKnown RBP16.41■□□□□ 0.22
SEC23B-205ENST00000422877 LACTBP83111 547 aaPredicted RBP16.41■□□□□ 0.22
SEC23B-205ENST00000422877 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms