RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 PNMA3Q9UL41 463 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 AGTPBP1Q9UPW5 1226 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 LAMA4Q16363 1823 aa11.53□□□□□ -0.56
HERC3-204ENST00000422770 HIP1O00291 1037 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 TLR2O60603 784 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 PRDM1O75626 825 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 AKR1B1P15121 316 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 OSBPP22059 807 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 BACE1P56817 501 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 ICA1Q05084 483 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 MOGSQ13724 837 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 VPS53Q5VIR6 699 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 GPAT2Q6NUI2 795 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
HERC3-204ENST00000422770 TMEM179Q6ZVK1 233 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 WDR18Q9BV38 432 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 CFHR5Q9BXR6 569 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 ZNF287Q9HBT7 754 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 TRIM17Q9Y577 477 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 CCDC171Q6TFL3 1326 aa11.52□□□□□ -0.57
HERC3-204ENST00000422770 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
HERC3-204ENST00000422770 USP14P54578 494 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 CTDSPL2Q05D32 466 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 PDE4BQ07343 736 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 PPARAQ07869 468 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 SBK1Q52WX2 424 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 ZNF589Q86UQ0 364 aaPredicted RBP11.51□□□□□ -0.57
HERC3-204ENST00000422770 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
HERC3-204ENST00000422770 ACER1Q8TDN7 264 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
HERC3-204ENST00000422770 GREB1LQ9C091 1923 aaPredicted RBP11.5□□□□□ -0.57
HERC3-204ENST00000422770 ARHGEF6Q15052 776 aa11.5□□□□□ -0.57
HERC3-204ENST00000422770 NOM1Q5C9Z4 860 aaKnown RBP11.5□□□□□ -0.57
HERC3-204ENST00000422770 RRP12Q5JTH9 1297 aaKnown RBP11.5□□□□□ -0.57
HERC3-204ENST00000422770 SH2D4AQ9H788 454 aa11.5□□□□□ -0.57
HERC3-204ENST00000422770 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
HERC3-204ENST00000422770 ISY1Q9ULR0 285 aaKnown RBP11.5□□□□□ -0.57
HERC3-204ENST00000422770 ROBO3Q96MS0 1386 aa11.5□□□□□ -0.57
HERC3-204ENST00000422770 CCDC85CA6NKD9 419 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 FMNL1O95466 1100 aaPredicted RBP11.49□□□□□ -0.57
HERC3-204ENST00000422770 TSPY3P0CV98 308 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 TSPY8P0CW00 308 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 RASA1P20936 1047 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 GUCY1A2P33402 732 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 HAND2P61296 217 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 ANKRD13CQ8N6S4 541 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 ABHD8Q96I13 439 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 PAGR1Q9BTK6 254 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 TANGO6Q9C0B7 1094 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 ARHGAP39Q9C0H5 1083 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 ASCC2Q9H1I8 757 aaPredicted RBP11.49□□□□□ -0.57
HERC3-204ENST00000422770 CWC22Q9HCG8 908 aaKnown RBP11.49□□□□□ -0.57
HERC3-204ENST00000422770 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 SLC45A1Q9Y2W3 748 aa11.49□□□□□ -0.57
HERC3-204ENST00000422770 COL11A1P12107 1806 aaPredicted RBP11.49□□□□□ -0.57
HERC3-204ENST00000422770 RANBP6O60518 1105 aaKnown RBP11.48□□□□□ -0.57
HERC3-204ENST00000422770 HSPD1P10809 573 aaKnown RBP11.48□□□□□ -0.57
HERC3-204ENST00000422770 LACTBP83111 547 aaPredicted RBP11.48□□□□□ -0.57
HERC3-204ENST00000422770 FAM47AQ5JRC9 791 aa11.48□□□□□ -0.57
HERC3-204ENST00000422770 OTOP1Q7RTM1 612 aa11.48□□□□□ -0.57
HERC3-204ENST00000422770 TICAM2Q86XR7 235 aa11.48□□□□□ -0.57
HERC3-204ENST00000422770 CCAR1Q8IX12 1150 aaKnown RBP11.48□□□□□ -0.57
HERC3-204ENST00000422770 SPICE1Q8N0Z3 855 aa11.48□□□□□ -0.57
HERC3-204ENST00000422770 RUFY2Q8WXA3 655 aa11.48□□□□□ -0.57
HERC3-204ENST00000422770 KIAA1683Q9H0B3 1180 aa11.48□□□□□ -0.57
HERC3-204ENST00000422770 KANSL2Q9H9L4 492 aa11.48□□□□□ -0.57
HERC3-204ENST00000422770 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
HERC3-204ENST00000422770 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 TSPY2A6NKD2 308 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 FOXP2O15409 715 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 FGAP02671 866 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 EEF2P13639 858 aaKnown RBP11.47□□□□□ -0.57
HERC3-204ENST00000422770 VCAM1P19320 739 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 PSMC4P43686 418 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 C17orf99Q6UX52 265 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 CHMP4CQ96CF2 233 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 RPAP3Q9H6T3 665 aaPredicted RBP11.47□□□□□ -0.57
HERC3-204ENST00000422770 GOPCQ9HD26 462 aa11.47□□□□□ -0.57
HERC3-204ENST00000422770 A0A1W2PRG0 241 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.57
HERC3-204ENST00000422770 GCLCP48506 637 aaPredicted RBP11.46□□□□□ -0.57
HERC3-204ENST00000422770 FCGRTP55899 365 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 HERVK_113P62684 666 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 TFAP4Q01664 338 aa11.46□□□□□ -0.57
HERC3-204ENST00000422770 PKN2Q16513 984 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms