RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 HMGCS2P54868 508 aa9.93□□□□□ -0.82
TRIM43CP-201ENST00000422468 JAG1P78504 1218 aa9.93□□□□□ -0.82
TRIM43CP-201ENST00000422468 SHROOM1Q2M3G4 852 aaPredicted RBP9.93□□□□□ -0.82
TRIM43CP-201ENST00000422468 SLC4A8Q2Y0W8 1093 aa9.93□□□□□ -0.82
TRIM43CP-201ENST00000422468 SLC9C2Q5TAH2 1124 aa9.93□□□□□ -0.82
TRIM43CP-201ENST00000422468 EHD4Q9H223 541 aa9.93□□□□□ -0.82
TRIM43CP-201ENST00000422468 ZBTB21Q9ULJ3 1066 aa9.93□□□□□ -0.82
TRIM43CP-201ENST00000422468 MYH8P13535 1937 aa9.93□□□□□ -0.82
TRIM43CP-201ENST00000422468 MAGEB6P1A0A0J9YX57 407 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 TCRBV5S4A2TA0A5A2 114 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 C19orf81C9J6K1 198 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 GOLIM4O00461 696 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 TNPO2O14787 897 aaKnown RBP9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 GDF11O95390 407 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 MYCP01106 439 aaPredicted RBP9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 PDE6AP16499 860 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 TIE1P35590 1138 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 GCLCP48506 637 aaPredicted RBP9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 BACE1P56817 501 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 PRKCZQ05513 592 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 MTMR2Q13614 643 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 TATDN1Q6P1N9 297 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 TTC6Q86TZ1 520 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 SKAP1Q86WV1 359 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 ANKRD13CQ8N6S4 541 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 DNAJC2Q99543 621 aaKnown RBP9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 RIOK1Q9BRS2 568 aaKnown RBP9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 ASCC2Q9H1I8 757 aaPredicted RBP9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 TMOD4Q9NZQ9 345 aa9.92□□□□□ -0.82
TRIM43CP-201ENST00000422468 ATP5JP18859 108 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 NBR1Q14596 966 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 FAM110CQ1W6H9 321 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 SLAIN1Q8ND83 568 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 PI4K2BQ8TCG2 481 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 CRNKL1Q9BZJ0 848 aaKnown RBP9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 LRRCC1Q9C099 1032 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 BCL11AQ9H165 835 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 BIN2Q9UBW5 565 aaPredicted RBP9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 SERPINB13Q9UIV8 391 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 BAZ2AQ9UIF9 1905 aaKnown RBP9.91□□□□□ -0.82
TRIM43CP-201ENST00000422468 ZNF532Q9HCE3 1301 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 USP17L10C9JJH3 530 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 ADCY3O60266 1144 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 PPP1R37O75864 691 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 GH2P01242 217 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 CCL5P13501 91 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 HOXA7P31268 230 aaPredicted RBP9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 FLT3LGP49771 235 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 CLCN6P51797 869 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 IRX3P78415 501 aaPredicted RBP9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 IRF5Q13568 498 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 MTFR1Q15390 333 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 COA7Q96BR5 231 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 HAUS7Q99871 368 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 BOLA2Q9H3K6 86 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 PAG1Q9NWQ8 432 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 MORF4L1Q9UBU8 362 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 PLXNB2O15031 1838 aa9.9□□□□□ -0.82
TRIM43CP-201ENST00000422468 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 FOXP2O15409 715 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 POLR3DP05423 398 aaPredicted RBP9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 ADD2P35612 726 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 PLCD1P51178 756 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 UBXN2AP68543 259 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 ABCB5Q2M3G0 1257 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 CERKLQ49MI3 558 aaPredicted RBP9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 LCORLQ8N3X6 602 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 PXYLP1Q8TE99 480 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 P2RX7Q99572 595 aaKnown RBP9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 CEP290O15078 2479 aa9.89□□□□□ -0.83
TRIM43CP-201ENST00000422468 GJB1P08034 283 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 ELNP15502 786 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 PDE4AP27815 886 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 SHMT1P34896 483 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 GJA8P48165 433 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 HERVK_113P62684 666 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 HDAC1Q13547 482 aaPredicted RBP9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L2Q6R6M4 530 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 SMC5Q8IY18 1101 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 FEZ1Q99689 392 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 KIAA1683Q9H0B3 1180 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 RNF208Q9H0X6 261 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 CABP5Q9NP86 173 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 BMP2KQ9NSY1 1161 aaPredicted RBP9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 MCM9Q9NXL9 1143 aa9.88□□□□□ -0.83
TRIM43CP-201ENST00000422468 INHAP05111 366 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP14P54578 494 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 GABPAQ06546 454 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 RAB3GAP1Q15042 981 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 ZSCAN25Q6NSZ9 544 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 GPRC5AQ8NFJ5 357 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 GTF3C2Q8WUA4 911 aaPredicted RBP9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 SDR42E1Q8WUS8 393 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 SHISA4Q96DD7 197 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms