RNA–Protein interactions for RNA: ENST00000422361.6

RUNX1T1-204, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-204ENST00000422361 TMC6Q7Z403 805 aa11.89□□□□□ -0.51
RUNX1T1-204ENST00000422361 NSUN4Q96CB9 384 aaKnown RBP11.89□□□□□ -0.51
RUNX1T1-204ENST00000422361 CRNKL1Q9BZJ0 848 aaKnown RBP11.89□□□□□ -0.51
RUNX1T1-204ENST00000422361 AATFQ9NY61 560 aaKnown RBP eCLIP11.89□□□□□ -0.51
RUNX1T1-204ENST00000422361 PCDHA5Q9Y5H7 936 aa11.89□□□□□ -0.51
RUNX1T1-204ENST00000422361 KRT2P35908 639 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 ARID5BQ14865 1188 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 POSTNQ15063 836 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 VPS72Q15906 364 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 PKN1Q16512 942 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 TRIM75PA6NK02 468 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 UBE2Q2LH0YL09 131 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 FAM193AP78312 1265 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 TROAPQ12815 778 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 ELF2Q15723 593 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 SPTY2D1Q68D10 685 aaPredicted RBP11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 SPATA20Q8TB22 786 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 CELF1Q92879 486 aaKnown RBP11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 ARPP21Q9UBL0 812 aaPredicted RBP11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 IQSEC3Q9UPP2 1182 aaPredicted RBP11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 NAV1Q8NEY1 1877 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 CDK5RAP2Q96SN8 1893 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
RUNX1T1-204ENST00000422361 UBASH3AP57075 661 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 DYNLL1P63167 89 aaKnown RBP11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 ARMCX5Q6P1M9 558 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 FCHSD1Q86WN1 690 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 FOXP4Q8IVH2 680 aaPredicted RBP11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 ENOX1Q8TC92 643 aaKnown RBP11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 ZNF384Q8TF68 577 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 PCDHB6Q9Y5E3 794 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 USP27XA6NNY8 438 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 LMOD1P29536 600 aaPredicted RBP11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 NR5A1Q13285 461 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 MORC3Q14149 939 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 TMTC3Q6ZXV5 915 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 SMARCE1Q969G3 411 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 MAN1B1Q9UKM7 699 aa11.87□□□□□ -0.51
RUNX1T1-204ENST00000422361 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 TRAPPC10P48553 1259 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 MECOMQ03112 1051 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 CCDC178Q5BJE1 867 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 VSTM4Q8IW00 320 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 ERO1AQ96HE7 468 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 TRERF1Q96PN7 1200 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 PYM1Q9BRP8 204 aaKnown RBP11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 CABP5Q9NP86 173 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 POLR2DO15514 142 aaKnown RBP11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 SERPINC1P01008 464 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 ERCC5P28715 1186 aaPredicted RBP11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 CYP2C19P33261 490 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 PDE4BQ07343 736 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 CREBRFQ8IUR6 639 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 OXER1Q8TDS5 423 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 TNFRSF25Q93038 417 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 TMX1Q9H3N1 280 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 CNTNAP5Q8WYK1 1306 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
RUNX1T1-204ENST00000422361 USP17L12C9JPN9 530 aa11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 USP17L21D6R901 530 aa11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 ZPR1O75312 459 aa11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 NBPF5PQ86XG9 351 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 FAM177A1Q8N128 213 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 CTCFLQ8NI51 663 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 NUTM2BA6NNL0 878 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 NUTM2EB1AL46 878 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 HNRNPH2P55795 449 aaKnown RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 SH3RF1Q7Z6J0 888 aa11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 NUTM2AQ8IVF1 878 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 ANKS1AQ92625 1134 aa11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 CSRNP2Q9H175 543 aa11.85□□□□□ -0.51
RUNX1T1-204ENST00000422361 NPHP1O15259 732 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 ATP1A3P13637 1013 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 ZNF18P17022 549 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 BMP6P22004 513 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 ISM2Q6H9L7 571 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 SHISA4Q96DD7 197 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 SH3GLB2Q9NR46 395 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 VPS54Q9P1Q0 977 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 V9GY48 417 aaPredicted RBP11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 MYH1P12882 1939 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 ROBO3Q96MS0 1386 aa11.84□□□□□ -0.51
RUNX1T1-204ENST00000422361 SLU7O95391 586 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms