RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 EVX2Q03828 476 aa26.28■■□□□ 1.8
TRAF4-204ENST00000422344 NKX2-3Q8TAU0 364 aa26.28■■□□□ 1.8
TRAF4-204ENST00000422344 STRBPQ96SI9 672 aaKnown RBP26.28■■□□□ 1.8
TRAF4-204ENST00000422344 CCL5P13501 91 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 FCGRTP55899 365 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 IRX3P78415 501 aaPredicted RBP26.27■■□□□ 1.8
TRAF4-204ENST00000422344 PRKCZQ05513 592 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 C12orf60Q5U649 245 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 B4GALNT3Q6L9W6 998 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 USP17L2Q6R6M4 530 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 OSBP2Q969R2 916 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 DYNLL2Q96FJ2 89 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 LNPKQ9C0E8 428 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 ARPP21Q9UBL0 812 aaPredicted RBP26.27■■□□□ 1.8
TRAF4-204ENST00000422344 SALL3Q9BXA9 1300 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 MGAMO43451 1857 aa26.27■■□□□ 1.8
TRAF4-204ENST00000422344 BAZ2AQ9UIF9 1905 aaKnown RBP26.26■■□□□ 1.79
TRAF4-204ENST00000422344 GNAT2P19087 354 aa26.26■■□□□ 1.79
TRAF4-204ENST00000422344 SMC5Q8IY18 1101 aa26.26■■□□□ 1.79
TRAF4-204ENST00000422344 SLC44A5Q8NCS7 719 aa26.26■■□□□ 1.79
TRAF4-204ENST00000422344 RNF208Q9H0X6 261 aa26.26■■□□□ 1.79
TRAF4-204ENST00000422344 ASCC2Q9H1I8 757 aaPredicted RBP26.26■■□□□ 1.79
TRAF4-204ENST00000422344 STAP2Q9UGK3 403 aa26.26■■□□□ 1.79
TRAF4-204ENST00000422344 CYP2D7A0A087X1C5 515 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 GPAA1O43292 621 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 GJB1P08034 283 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 GJA8P48165 433 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 GCLCP48506 637 aaPredicted RBP26.25■■□□□ 1.79
TRAF4-204ENST00000422344 USP14P54578 494 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 PDE1AP54750 535 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 UBXN2AP68543 259 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 ZYXQ15942 572 aaKnown RBP26.25■■□□□ 1.79
TRAF4-204ENST00000422344 CHRDL2Q6WN34 429 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 ANKRD13CQ8N6S4 541 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 GABRQQ9UN88 632 aa26.25■■□□□ 1.79
TRAF4-204ENST00000422344 IGHDP01880 384 aa26.24■■□□□ 1.79
TRAF4-204ENST00000422344 CTR9Q6PD62 1173 aa26.24■■□□□ 1.79
TRAF4-204ENST00000422344 M0R2C6 588 aa26.23■■□□□ 1.79
TRAF4-204ENST00000422344 APPP05067 770 aa26.23■■□□□ 1.79
TRAF4-204ENST00000422344 SEPT2Q15019 361 aa26.23■■□□□ 1.79
TRAF4-204ENST00000422344 GIMAP6Q6P9H5 292 aa26.23■■□□□ 1.79
TRAF4-204ENST00000422344 TMEM179Q6ZVK1 233 aa26.23■■□□□ 1.79
TRAF4-204ENST00000422344 EVI5LQ96CN4 794 aa26.23■■□□□ 1.79
TRAF4-204ENST00000422344 EMILIN3Q9NT22 766 aa26.23■■□□□ 1.79
TRAF4-204ENST00000422344 GSG1L2A8MUP6 293 aa26.22■■□□□ 1.79
TRAF4-204ENST00000422344 HOXA7P31268 230 aaPredicted RBP26.22■■□□□ 1.79
TRAF4-204ENST00000422344 TDO2P48775 406 aa26.22■■□□□ 1.79
TRAF4-204ENST00000422344 CDK8P49336 464 aa26.22■■□□□ 1.79
TRAF4-204ENST00000422344 FAM110CQ1W6H9 321 aa26.22■■□□□ 1.79
TRAF4-204ENST00000422344 C16orf86Q6ZW13 317 aa26.22■■□□□ 1.79
TRAF4-204ENST00000422344 SLAIN1Q8ND83 568 aa26.22■■□□□ 1.79
TRAF4-204ENST00000422344 KIAA1683Q9H0B3 1180 aa26.22■■□□□ 1.79
TRAF4-204ENST00000422344 MYH8P13535 1937 aa26.22■■□□□ 1.79
TRAF4-204ENST00000422344 UBE2Q1Q7Z7E8 422 aa26.21■■□□□ 1.79
TRAF4-204ENST00000422344 CHD1LQ86WJ1 897 aa26.21■■□□□ 1.79
TRAF4-204ENST00000422344 ACER1Q8TDN7 264 aa26.21■■□□□ 1.79
TRAF4-204ENST00000422344 CCDC17Q96LX7 622 aa26.21■■□□□ 1.79
TRAF4-204ENST00000422344 NACAP1Q9BZK3 213 aa26.21■■□□□ 1.79
TRAF4-204ENST00000422344 RANBP2P49792 3224 aaKnown RBP26.21■■□□□ 1.79
TRAF4-204ENST00000422344 SZT2Q5T011 3432 aa26.2■■□□□ 1.79
TRAF4-204ENST00000422344 MINDY4BA8MYZ0 360 aa26.2■■□□□ 1.78
TRAF4-204ENST00000422344 TNPO2O14787 897 aaKnown RBP26.2■■□□□ 1.78
TRAF4-204ENST00000422344 GUCY1A2P33402 732 aa26.2■■□□□ 1.78
TRAF4-204ENST00000422344 IRX6P78412 446 aaPredicted RBP26.2■■□□□ 1.78
TRAF4-204ENST00000422344 SBK1Q52WX2 424 aa26.2■■□□□ 1.78
TRAF4-204ENST00000422344 ZMYM1Q5SVZ6 1142 aa26.2■■□□□ 1.78
TRAF4-204ENST00000422344 C12orf42Q96LP6 360 aa26.2■■□□□ 1.78
TRAF4-204ENST00000422344 HTATIP2Q9BUP3 242 aa26.2■■□□□ 1.78
TRAF4-204ENST00000422344 UNC93B1Q9H1C4 597 aa26.2■■□□□ 1.78
TRAF4-204ENST00000422344 ADCY3O60266 1144 aa26.19■■□□□ 1.78
TRAF4-204ENST00000422344 AKR1B1P15121 316 aa26.19■■□□□ 1.78
TRAF4-204ENST00000422344 NUCB1Q02818 461 aa26.19■■□□□ 1.78
TRAF4-204ENST00000422344 U2AF1L4Q8WU68 220 aaKnown RBP26.19■■□□□ 1.78
TRAF4-204ENST00000422344 SEC62Q99442 399 aaKnown RBP26.19■■□□□ 1.78
TRAF4-204ENST00000422344 P2RX7Q99572 595 aaKnown RBP26.19■■□□□ 1.78
TRAF4-204ENST00000422344 RBM27Q9P2N5 1060 aaKnown RBP26.19■■□□□ 1.78
TRAF4-204ENST00000422344 PATL2C9JE40 543 aaKnown RBP26.18■■□□□ 1.78
TRAF4-204ENST00000422344 SMIM22K7EJ46 135 aa26.18■■□□□ 1.78
TRAF4-204ENST00000422344 ELNP15502 786 aa26.18■■□□□ 1.78
TRAF4-204ENST00000422344 FLT3LGP49771 235 aa26.18■■□□□ 1.78
TRAF4-204ENST00000422344 HERVK_113P62684 666 aa26.18■■□□□ 1.78
TRAF4-204ENST00000422344 GTF3C2Q8WUA4 911 aaPredicted RBP26.18■■□□□ 1.78
TRAF4-204ENST00000422344 ARHGEF10LQ9HCE6 1279 aa26.18■■□□□ 1.78
TRAF4-204ENST00000422344 TRIM6-TRIM34B2RNG4 842 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L15C9J2P7 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L13C9JLJ4 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L11C9JVI0 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L18D6R9N7 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L22D6RA61 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L17D6RBQ6 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L19D6RCP7 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L20D6RJB6 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 ICA1Q05084 483 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 USP17L24Q0WX57 530 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 COA7Q96BR5 231 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 SH2D4AQ9H788 454 aa26.17■■□□□ 1.78
TRAF4-204ENST00000422344 FARP2O94887 1054 aaPredicted RBP26.16■■□□□ 1.78
TRAF4-204ENST00000422344 SGPL1O95470 568 aa26.16■■□□□ 1.78
TRAF4-204ENST00000422344 VCAM1P19320 739 aa26.16■■□□□ 1.78
TRAF4-204ENST00000422344 IFNL3Q8IZI9 196 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms