RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TRIM4Q9C037 500 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 NUCKS1Q9H1E3 243 aaKnown RBP13.67□□□□□ -0.22
CLCN4-203ENST00000421085 VEZTQ9HBM0 779 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 AMFRQ9UKV5 643 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 SH2D4BQ5SQS7 431 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 LGSNQ5TDP6 509 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 FANCLQ9NW38 375 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 ARHGAP42A6NI28 874 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 USP28Q96RU2 1077 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 PKD2L1Q9P0L9 805 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 ATP8B1O43520 1251 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 IFT88Q13099 833 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 MYSM1Q5VVJ2 828 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 APPBP2Q92624 585 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 TM6SF1Q9BZW5 370 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 RFC4P35249 363 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
CLCN4-203ENST00000421085 COG7P83436 770 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 MORC3Q14149 939 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 HAUS3Q68CZ6 603 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 CCDC13Q8IYE1 715 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 LRWD1Q9UFC0 647 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 JAG2Q9Y219 1238 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 TRPC3Q13507 836 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 SRGAP1Q7Z6B7 1085 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
CLCN4-203ENST00000421085 SNX29Q8TEQ0 813 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 DPH5Q9H2P9 285 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 MRC2Q9UBG0 1479 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 RASIP1Q5U651 963 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 CABP7Q86V35 215 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 SPATS2LQ9NUQ6 558 aaKnown RBP13.66□□□□□ -0.22
CLCN4-203ENST00000421085 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 HARSP12081 509 aaKnown RBP13.66□□□□□ -0.22
CLCN4-203ENST00000421085 LRRD1A4D1F6 860 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 SMIM24O75264 130 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 HMGB2P26583 209 aaKnown RBP13.66□□□□□ -0.22
CLCN4-203ENST00000421085 CTDSPL2Q05D32 466 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 E2F5Q15329 346 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 LRRC59Q96AG4 307 aaKnown RBP13.66□□□□□ -0.22
CLCN4-203ENST00000421085 IQCDQ96DY2 449 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 LSM14BQ9BX40 385 aaKnown RBP13.66□□□□□ -0.22
CLCN4-203ENST00000421085 FAN1Q9Y2M0 1017 aa13.66□□□□□ -0.22
CLCN4-203ENST00000421085 CCDC169A6NNP5 214 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 CDC25BP30305 580 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 ST5P78524 1137 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 SP4Q02446 784 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 PALD1Q9ULE6 856 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 E7EWF7 191 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 SH3BP5O60239 455 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 PLCG2P16885 1265 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 PTPROQ16827 1216 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLCN4-203ENST00000421085 SETDB2Q96T68 719 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 RAD51AP2Q09MP3 1159 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 SAP30BPQ9UHR5 308 aaKnown RBP13.65□□□□□ -0.22
CLCN4-203ENST00000421085 RIMS2Q9UQ26 1411 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 AFAP1L2Q8N4X5 818 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 KBTBD3Q8NAB2 608 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 HAUS4Q9H6D7 363 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 EYA2O00167 538 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 LDHBP07195 334 aaKnown RBP13.65□□□□□ -0.22
CLCN4-203ENST00000421085 SH3BGRP55822 239 aaPredicted RBP13.65□□□□□ -0.22
CLCN4-203ENST00000421085 U2AF1L4Q8WU68 220 aaKnown RBP13.65□□□□□ -0.22
CLCN4-203ENST00000421085 CDC23Q9UJX2 597 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 TRIM35Q9UPQ4 493 aa13.65□□□□□ -0.22
CLCN4-203ENST00000421085 TCP1P17987 556 aaKnown RBP13.64□□□□□ -0.23
CLCN4-203ENST00000421085 PPP2R5DQ14738 602 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 UHMK1Q8TAS1 419 aaKnown RBP13.64□□□□□ -0.23
CLCN4-203ENST00000421085 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 TPCN1Q9ULQ1 816 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 USH1CQ9Y6N9 552 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 IRX4P78413 519 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 ZNF827Q17R98 1081 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 AEBP2Q6ZN18 517 aaPredicted RBP13.64□□□□□ -0.23
CLCN4-203ENST00000421085 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 P3H4Q92791 437 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 ZFYVE9O95405 1425 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 hCG_1642624A0A1W2PR95 340 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 PRDM1O75626 825 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 BCRP11274 1271 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 TTC6Q86TZ1 520 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
CLCN4-203ENST00000421085 RBBP5Q15291 538 aaKnown RBP13.64□□□□□ -0.23
CLCN4-203ENST00000421085 ARHGAP44Q17R89 818 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 NCAPH2Q6IBW4 605 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 DZIP3Q86Y13 1208 aaKnown RBP13.64□□□□□ -0.23
CLCN4-203ENST00000421085 KSR1Q8IVT5 923 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 NDUFA8P51970 172 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 MAIP1Q8WWC4 291 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
CLCN4-203ENST00000421085 VPS54Q9P1Q0 977 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 FLT4P35916 1363 aa13.64□□□□□ -0.23
CLCN4-203ENST00000421085 BACH1O14867 736 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms