RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 CCDC171Q6TFL3 1326 aa18.93■□□□□ 0.62
VAT1-202ENST00000420567 LOC285556D6RIA3 1793 aa18.92■□□□□ 0.62
VAT1-202ENST00000420567 C19orf81C9J6K1 198 aa18.92■□□□□ 0.62
VAT1-202ENST00000420567 PRDM1O75626 825 aa18.92■□□□□ 0.62
VAT1-202ENST00000420567 PPARAQ07869 468 aa18.92■□□□□ 0.62
VAT1-202ENST00000420567 ERO1AQ96HE7 468 aa18.92■□□□□ 0.62
VAT1-202ENST00000420567 CCDC17Q96LX7 622 aa18.92■□□□□ 0.62
VAT1-202ENST00000420567 EMILIN3Q9NT22 766 aa18.92■□□□□ 0.62
VAT1-202ENST00000420567 CASP8AP2Q9UKL3 1982 aa18.92■□□□□ 0.62
VAT1-202ENST00000420567 RASA1P20936 1047 aa18.91■□□□□ 0.62
VAT1-202ENST00000420567 CAP1Q01518 475 aa18.91■□□□□ 0.62
VAT1-202ENST00000420567 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
VAT1-202ENST00000420567 C17orf99Q6UX52 265 aa18.91■□□□□ 0.62
VAT1-202ENST00000420567 SMCR8Q8TEV9 937 aaPredicted RBP18.91■□□□□ 0.62
VAT1-202ENST00000420567 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
VAT1-202ENST00000420567 MKNK2Q9HBH9 465 aa18.91■□□□□ 0.62
VAT1-202ENST00000420567 PNMA3Q9UL41 463 aa18.91■□□□□ 0.62
VAT1-202ENST00000420567 TRIM17Q9Y577 477 aa18.91■□□□□ 0.62
VAT1-202ENST00000420567 A0A1W2PRG0 241 aa18.9■□□□□ 0.62
VAT1-202ENST00000420567 HIP1O00291 1037 aa18.9■□□□□ 0.62
VAT1-202ENST00000420567 HSPD1P10809 573 aaKnown RBP18.9■□□□□ 0.62
VAT1-202ENST00000420567 ICA1Q05084 483 aa18.9■□□□□ 0.62
VAT1-202ENST00000420567 PABPC4Q13310 644 aaKnown RBP eCLIP18.9■□□□□ 0.622e-8■■■□□ 17.5
VAT1-202ENST00000420567 ARHGAP39Q9C0H5 1083 aa18.9■□□□□ 0.62
VAT1-202ENST00000420567 KIAA1683Q9H0B3 1180 aa18.9■□□□□ 0.62
VAT1-202ENST00000420567 PTPRFP10586 1907 aa18.9■□□□□ 0.62
VAT1-202ENST00000420567 OSBPP22059 807 aa18.89■□□□□ 0.61
VAT1-202ENST00000420567 CTDSPL2Q05D32 466 aa18.89■□□□□ 0.61
VAT1-202ENST00000420567 ABHD8Q96I13 439 aa18.89■□□□□ 0.61
VAT1-202ENST00000420567 ASCC2Q9H1I8 757 aaPredicted RBP18.89■□□□□ 0.61
VAT1-202ENST00000420567 CAPN15O75808 1086 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 SLC3A2P08195 630 aaKnown RBP18.88■□□□□ 0.61
VAT1-202ENST00000420567 BCRP11274 1271 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 USP14P54578 494 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 MFAP1P55081 439 aaKnown RBP18.88■□□□□ 0.61
VAT1-202ENST00000420567 IRX3P78415 501 aaPredicted RBP18.88■□□□□ 0.61
VAT1-202ENST00000420567 LACTBP83111 547 aaPredicted RBP18.88■□□□□ 0.61
VAT1-202ENST00000420567 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 OTOP1Q7RTM1 612 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 SIAH1Q8IUQ4 282 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 C12orf42Q96LP6 360 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.88■□□□□ 0.61
VAT1-202ENST00000420567 IL25Q9H293 177 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 ARHGEF10LQ9HCE6 1279 aa18.88■□□□□ 0.61
VAT1-202ENST00000420567 FGAP02671 866 aa18.87■□□□□ 0.61
VAT1-202ENST00000420567 EEF2P13639 858 aaKnown RBP18.87■□□□□ 0.61
VAT1-202ENST00000420567 VCAM1P19320 739 aa18.87■□□□□ 0.61
VAT1-202ENST00000420567 PDE4BQ07343 736 aa18.87■□□□□ 0.61
VAT1-202ENST00000420567 ALX1Q15699 326 aa18.87■□□□□ 0.61
VAT1-202ENST00000420567 ANKRD13CQ8N6S4 541 aa18.87■□□□□ 0.61
VAT1-202ENST00000420567 EFCC1Q9HA90 598 aa18.87■□□□□ 0.61
VAT1-202ENST00000420567 ZNF287Q9HBT7 754 aa18.87■□□□□ 0.61
VAT1-202ENST00000420567 INCENPQ9NQS7 918 aa18.87■□□□□ 0.61
VAT1-202ENST00000420567 CTGFP29279 349 aa18.86■□□□□ 0.61
VAT1-202ENST00000420567 HOXA7P31268 230 aaPredicted RBP18.86■□□□□ 0.61
VAT1-202ENST00000420567 KIF22Q14807 665 aa18.86■□□□□ 0.61
VAT1-202ENST00000420567 ZNF444Q8N0Y2 327 aaPredicted RBP18.86■□□□□ 0.61
VAT1-202ENST00000420567 P2RX7Q99572 595 aaKnown RBP18.86■□□□□ 0.61
VAT1-202ENST00000420567 KANSL2Q9H9L4 492 aa18.86■□□□□ 0.61
VAT1-202ENST00000420567 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
VAT1-202ENST00000420567 TACC3Q9Y6A5 838 aa18.86■□□□□ 0.61
VAT1-202ENST00000420567 ZMYM6O95789 1325 aa18.85■□□□□ 0.61
VAT1-202ENST00000420567 HAND2P61296 217 aa18.85■□□□□ 0.61
VAT1-202ENST00000420567 FAM47AQ5JRC9 791 aa18.85■□□□□ 0.61
VAT1-202ENST00000420567 KIAA1755Q5JYT7 1200 aa18.85■□□□□ 0.61
VAT1-202ENST00000420567 RPAP3Q9H6T3 665 aaPredicted RBP18.85■□□□□ 0.61
VAT1-202ENST00000420567 SH2D4AQ9H788 454 aa18.85■□□□□ 0.61
VAT1-202ENST00000420567 TMX2Q9Y320 296 aa18.85■□□□□ 0.61
VAT1-202ENST00000420567 PEX10O60683 326 aa18.84■□□□□ 0.61
VAT1-202ENST00000420567 TSPY3P0CV98 308 aa18.84■□□□□ 0.61
VAT1-202ENST00000420567 TSPY8P0CW00 308 aa18.84■□□□□ 0.61
VAT1-202ENST00000420567 CHMLP26374 656 aa18.84■□□□□ 0.61
VAT1-202ENST00000420567 PSMC4P43686 418 aa18.84■□□□□ 0.61
VAT1-202ENST00000420567 PKN2Q16513 984 aaKnown RBP18.84■□□□□ 0.61
VAT1-202ENST00000420567 FBXO46Q6PJ61 603 aaPredicted RBP18.84■□□□□ 0.61
VAT1-202ENST00000420567 SPICE1Q8N0Z3 855 aa18.84■□□□□ 0.61
VAT1-202ENST00000420567 ANAPC4Q9UJX5 808 aa18.84■□□□□ 0.61
VAT1-202ENST00000420567 ZSWIM8A7E2V4 1837 aa18.84■□□□□ 0.61
VAT1-202ENST00000420567 IGKV6D-41A0A0C4DH26 115 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L15C9J2P7 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L13C9JLJ4 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L11C9JVI0 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L18D6R9N7 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L22D6RA61 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L17D6RBQ6 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L19D6RCP7 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L20D6RJB6 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 RAD21O60216 631 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 FMNL1O95466 1100 aaPredicted RBP18.83■□□□□ 0.6
VAT1-202ENST00000420567 GCLCP48506 637 aaPredicted RBP18.83■□□□□ 0.6
VAT1-202ENST00000420567 HERVK_113P62684 666 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 TFAP4Q01664 338 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 USP17L24Q0WX57 530 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 ARHGEF6Q15052 776 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 IFFO2Q5TF58 517 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 CATSPERGQ6ZRH7 1159 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 TRIM47Q96LD4 638 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 VCPKMTQ9H867 229 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 TOMM22Q9NS69 142 aa18.83■□□□□ 0.6
VAT1-202ENST00000420567 HPS5Q9UPZ3 1129 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms