RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 EDC3Q96F86 508 aaKnown RBP17.45■□□□□ 0.38
NFE4-201ENST00000420058 APBA2Q99767 749 aa17.45■□□□□ 0.38
NFE4-201ENST00000420058 NDUFB9Q9Y6M9 179 aa17.45■□□□□ 0.38
NFE4-201ENST00000420058 ATP8B2P98198 1209 aa17.44■□□□□ 0.38
NFE4-201ENST00000420058 TLR7Q9NYK1 1049 aaKnown RBP17.44■□□□□ 0.38
NFE4-201ENST00000420058 BTBD7Q9P203 1132 aa17.44■□□□□ 0.38
NFE4-201ENST00000420058 DBNLQ9UJU6 430 aaKnown RBP17.44■□□□□ 0.38
NFE4-201ENST00000420058 CDH23Q9H251 3354 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 FOCADQ5VW36 1801 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L15C9J2P7 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L13C9JLJ4 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L11C9JVI0 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L18D6R9N7 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L22D6RA61 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L17D6RBQ6 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L19D6RCP7 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L20D6RJB6 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
NFE4-201ENST00000420058 IGSF3O75054 1194 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 HOXC6P09630 235 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 CYP7A1P22680 504 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 PTPREP23469 700 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 GUCY1A2P33402 732 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 USP17L24Q0WX57 530 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 LBX2Q6XYB7 198 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 TMEM57Q8N5G2 664 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 TRPV1Q8NER1 839 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 NPLOC4Q8TAT6 608 aa17.43■□□□□ 0.38
NFE4-201ENST00000420058 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
NFE4-201ENST00000420058 TTC28Q96AY4 2481 aa17.42■□□□□ 0.38
NFE4-201ENST00000420058 SLC15A5A6NIM6 579 aa17.42■□□□□ 0.38
NFE4-201ENST00000420058 ZYXQ15942 572 aaKnown RBP17.42■□□□□ 0.38
NFE4-201ENST00000420058 EAF2Q96CJ1 260 aaPredicted RBP17.42■□□□□ 0.38
NFE4-201ENST00000420058 GUCD1Q96NT3 240 aa17.42■□□□□ 0.38
NFE4-201ENST00000420058 TRIM34Q9BYJ4 488 aa17.42■□□□□ 0.38
NFE4-201ENST00000420058 KIAA1683Q9H0B3 1180 aa17.42■□□□□ 0.38
NFE4-201ENST00000420058 SURF6O75683 361 aaKnown RBP17.41■□□□□ 0.38
NFE4-201ENST00000420058 HLA-DOAP06340 250 aa17.41■□□□□ 0.38
NFE4-201ENST00000420058 VCAM1P19320 739 aa17.41■□□□□ 0.38
NFE4-201ENST00000420058 PLCD1P51178 756 aa17.41■□□□□ 0.38
NFE4-201ENST00000420058 GRB14Q14449 540 aa17.41■□□□□ 0.38
NFE4-201ENST00000420058 FAM109BQ6ICB4 259 aaPredicted RBP17.41■□□□□ 0.38
NFE4-201ENST00000420058 CCAR1Q8IX12 1150 aaKnown RBP17.41■□□□□ 0.38
NFE4-201ENST00000420058 MIGA1Q8NAN2 632 aa17.41■□□□□ 0.38
NFE4-201ENST00000420058 FRAT1Q92837 279 aaPredicted RBP17.41■□□□□ 0.38
NFE4-201ENST00000420058 SENP6Q9GZR1 1112 aaPredicted RBP17.41■□□□□ 0.38
NFE4-201ENST00000420058 CCDC8Q9H0W5 538 aaPredicted RBP17.41■□□□□ 0.38
NFE4-201ENST00000420058 EHD4Q9H223 541 aa17.41■□□□□ 0.38
NFE4-201ENST00000420058 ANTXR1Q9H6X2 564 aa17.41■□□□□ 0.38
NFE4-201ENST00000420058 DDX20Q9UHI6 824 aaKnown RBP17.41■□□□□ 0.38
NFE4-201ENST00000420058 SHMT1P34896 483 aa17.4■□□□□ 0.38
NFE4-201ENST00000420058 EVX2Q03828 476 aa17.4■□□□□ 0.38
NFE4-201ENST00000420058 MFSD14CQ5VZR4 134 aa17.4■□□□□ 0.38
NFE4-201ENST00000420058 SERPINB13Q9UIV8 391 aa17.4■□□□□ 0.38
NFE4-201ENST00000420058 MAST2Q6P0Q8 1798 aa17.39■□□□□ 0.37
NFE4-201ENST00000420058 SPDYE16A6NNV3 312 aaPredicted RBP17.39■□□□□ 0.37
NFE4-201ENST00000420058 CYP2C19P33261 490 aa17.39■□□□□ 0.37
NFE4-201ENST00000420058 CCNA1P78396 465 aa17.39■□□□□ 0.37
NFE4-201ENST00000420058 CERKLQ49MI3 558 aaPredicted RBP17.39■□□□□ 0.37
NFE4-201ENST00000420058 MAGEB6Q8N7X4 407 aa17.39■□□□□ 0.37
NFE4-201ENST00000420058 LPAR1Q92633 364 aa17.39■□□□□ 0.37
NFE4-201ENST00000420058 COL25A1Q9BXS0 654 aaPredicted RBP17.39■□□□□ 0.37
NFE4-201ENST00000420058 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
NFE4-201ENST00000420058 A0A1W2PRG0 241 aa17.38■□□□□ 0.37
NFE4-201ENST00000420058 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
NFE4-201ENST00000420058 GLRX3O76003 335 aaKnown RBP17.38■□□□□ 0.37
NFE4-201ENST00000420058 ATN1P54259 1190 aaPredicted RBP17.38■□□□□ 0.37
NFE4-201ENST00000420058 USP14P54578 494 aa17.38■□□□□ 0.37
NFE4-201ENST00000420058 GABPAQ06546 454 aa17.38■□□□□ 0.37
NFE4-201ENST00000420058 RAB3GAP1Q15042 981 aa17.38■□□□□ 0.37
NFE4-201ENST00000420058 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
NFE4-201ENST00000420058 FEZ1Q99689 392 aa17.38■□□□□ 0.37
NFE4-201ENST00000420058 RIOK1Q9BRS2 568 aaKnown RBP17.38■□□□□ 0.37
NFE4-201ENST00000420058 CYBAP13498 195 aa17.37■□□□□ 0.37
NFE4-201ENST00000420058 USP5P45974 858 aa17.37■□□□□ 0.37
NFE4-201ENST00000420058 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
NFE4-201ENST00000420058 OS9Q13438 667 aaPredicted RBP17.37■□□□□ 0.37
NFE4-201ENST00000420058 KIAA1755Q5JYT7 1200 aa17.37■□□□□ 0.37
NFE4-201ENST00000420058 RPAP3Q9H6T3 665 aaPredicted RBP17.37■□□□□ 0.37
NFE4-201ENST00000420058 MYH1P12882 1939 aa17.37■□□□□ 0.37
NFE4-201ENST00000420058 DNM1LO00429 736 aa17.36■□□□□ 0.37
NFE4-201ENST00000420058 CNGA1P29973 690 aa17.36■□□□□ 0.37
NFE4-201ENST00000420058 SEPT2Q15019 361 aa17.36■□□□□ 0.37
NFE4-201ENST00000420058 WDR78Q5VTH9 848 aa17.36■□□□□ 0.37
NFE4-201ENST00000420058 TTC6Q86TZ1 520 aa17.36■□□□□ 0.37
NFE4-201ENST00000420058 MOV10L1Q9BXT6 1211 aaKnown RBP17.36■□□□□ 0.37
NFE4-201ENST00000420058 FRMPD3Q5JV73 1810 aa17.35■□□□□ 0.37
NFE4-201ENST00000420058 MSCO60682 206 aa17.35■□□□□ 0.37
NFE4-201ENST00000420058 COBLO75128 1261 aa17.35■□□□□ 0.37
NFE4-201ENST00000420058 RTP1P59025 263 aa17.35■□□□□ 0.37
NFE4-201ENST00000420058 GJC2Q5T442 439 aaPredicted RBP17.35■□□□□ 0.37
NFE4-201ENST00000420058 ZKSCAN2Q63HK3 967 aa17.35■□□□□ 0.37
NFE4-201ENST00000420058 SIAH1Q8IUQ4 282 aa17.35■□□□□ 0.37
NFE4-201ENST00000420058 FAM161BQ96MY7 647 aa17.35■□□□□ 0.37
NFE4-201ENST00000420058 CWC22Q9HCG8 908 aaKnown RBP17.35■□□□□ 0.37
NFE4-201ENST00000420058 RLBP1P12271 317 aa17.34■□□□□ 0.37
NFE4-201ENST00000420058 COG2Q14746 738 aa17.34■□□□□ 0.37
NFE4-201ENST00000420058 SHHQ15465 462 aa17.34■□□□□ 0.37
NFE4-201ENST00000420058 C9orf50Q5SZB4 431 aa17.34■□□□□ 0.37
NFE4-201ENST00000420058 OLFML2BQ68BL8 750 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms