RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 DACT1Q9NYF0 836 aa9.43□□□□□ -0.9
COL12A1-204ENST00000419671 GREB1LQ9C091 1923 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-204ENST00000419671 BRCA1P38398 1863 aaKnown RBP9.42□□□□□ -0.9
COL12A1-204ENST00000419671 TESPA1A2RU30 521 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-204ENST00000419671 GOLGA6L4A6NEF3 574 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 F8W031 263 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-204ENST00000419671 DDAH1O94760 285 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 LETM1O95202 739 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-204ENST00000419671 PLEKHA8P1O95397 391 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 DEXIO95424 95 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 TFAP4Q01664 338 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 LINC00301Q8NCQ3 95 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 BICD2Q8TD16 824 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 SHISA4Q96DD7 197 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 EYA3Q99504 573 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 RNF26Q9BY78 433 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-204ENST00000419671 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-204ENST00000419671 TSPY26PQ9H489 355 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 DBNDD1Q9H9R9 158 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 C10orf71Q711Q0 1435 aa9.42□□□□□ -0.9
COL12A1-204ENST00000419671 UTRNP46939 3433 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 MMP1P03956 469 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 CALM1P0DP23 149 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 CALM2P0DP24 149 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 CALM3P0DP25 149 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 RASA1P20936 1047 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 NT5C2P49902 561 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 TRIM29Q14134 588 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 E2F4Q16254 413 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 PKN1Q16512 942 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 AMOTL1Q8IY63 956 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 WASF1Q92558 559 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 GOLPH3LQ9H4A5 285 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 MKNK2Q9HBH9 465 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 PCDHB8Q9UN66 801 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 TTF2Q9UNY4 1162 aaKnown RBP9.41□□□□□ -0.9
COL12A1-204ENST00000419671 PCDHB13Q9Y5F0 798 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 YEATS4O95619 227 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 BAG6P46379 1132 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 PDAP1Q13442 181 aaKnown RBP9.41□□□□□ -0.9
COL12A1-204ENST00000419671 SNW1Q13573 536 aaKnown RBP9.41□□□□□ -0.9
COL12A1-204ENST00000419671 C16orf86Q6ZW13 317 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 ZNF467Q7Z7K2 595 aaPredicted RBP9.41□□□□□ -0.9
COL12A1-204ENST00000419671 RNF214Q8ND24 703 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 ANKS1AQ92625 1134 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 CNKSR1Q969H4 720 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL12A1-204ENST00000419671 NUP62CLQ9H1M0 184 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
COL12A1-204ENST00000419671 PCDHA7Q9UN72 937 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 KCNJ14Q9UNX9 436 aa9.41□□□□□ -0.9
COL12A1-204ENST00000419671 CNTNAP5Q8WYK1 1306 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 BTBD18B2RXH4 712 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 G3V3G9 751 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 RRP9O43818 475 aaKnown RBP9.4□□□□□ -0.9
COL12A1-204ENST00000419671 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
COL12A1-204ENST00000419671 ME1P48163 572 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 CDK8P49336 464 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 SCNN1DP51172 638 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 CAMK4Q16566 473 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 RBM43Q6ZSC3 357 aaKnown RBP9.4□□□□□ -0.9
COL12A1-204ENST00000419671 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 DGKHQ86XP1 1220 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 SRBD1Q8N5C6 995 aaKnown RBP9.4□□□□□ -0.9
COL12A1-204ENST00000419671 MAP3K14Q99558 947 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 DDX4Q9NQI0 724 aaKnown RBP9.4□□□□□ -0.9
COL12A1-204ENST00000419671 TCP11L1Q9NUJ3 509 aa9.4□□□□□ -0.9
COL12A1-204ENST00000419671 DDX19AQ9NUU7 478 aaKnown RBP9.4□□□□□ -0.9
COL12A1-204ENST00000419671 hCG_1642624A0A1W2PR95 340 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 ECE2O60344 883 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 TSPY3P0CV98 308 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 TSPY8P0CW00 308 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 SF3B2Q13435 895 aaKnown RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 AOC3Q16853 763 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 ANO1Q5XXA6 986 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 ADALQ6DHV7 355 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 HHIPL2Q6UWX4 724 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 CCAR1Q8IX12 1150 aaKnown RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 DIS3L2Q8IYB7 885 aaKnown RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 REM2Q8IYK8 340 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 ZNF444Q8N0Y2 327 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 ENGASEQ8NFI3 743 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 KCNG4Q8TDN1 519 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 SPTLC2O15270 562 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 GABPAQ06546 454 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 NR5A1Q13285 461 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 PICALMQ13492 652 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 STK38Q15208 465 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 PTPAQ15257 358 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms