RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 GREM2Q9H772 168 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 NSFL1CQ9UNZ2 370 aaKnown RBP8.75□□□□□ -1.01
HMGN1-205ENST00000419378 PTPRCP08575 1304 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 SCN4AP35499 1836 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 SPEF2Q9C093 1822 aa8.75□□□□□ -1.01
HMGN1-205ENST00000419378 TNFRSF10BO14763 440 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 ALDH1L1O75891 902 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 CT47B1P0C2W7 299 aaPredicted RBP8.74□□□□□ -1.01
HMGN1-205ENST00000419378 MPSTP25325 297 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 EIF6P56537 245 aaKnown RBP8.74□□□□□ -1.01
HMGN1-205ENST00000419378 RTN1Q16799 776 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 ALDH1L2Q3SY69 923 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 SLC4A10Q6U841 1118 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 ANKRD18AQ8IVF6 992 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 GPC2Q8N158 579 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 CDC5LQ99459 802 aaKnown RBP8.74□□□□□ -1.01
HMGN1-205ENST00000419378 AAASQ9NRG9 546 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 SMC4Q9NTJ3 1288 aa8.74□□□□□ -1.01
HMGN1-205ENST00000419378 IQCA1LA6NCM1 817 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 GRM8O00222 908 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 HSPA6P17066 643 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 HNRNPUQ00839 825 aaKnown RBP eCLIP8.73□□□□□ -1.01
HMGN1-205ENST00000419378 FSTL1Q12841 308 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 DGKZQ13574 1117 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 SMC1BQ8NDV3 1235 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 RGS22Q8NE09 1264 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 TBC1D16Q8TBP0 767 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 SRCIN1Q9C0H9 1055 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 KLK14Q9P0G3 267 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 STIM2Q9P246 746 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 POLLQ9UGP5 575 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 ZNRF3Q9ULT6 936 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 GJA3Q9Y6H8 435 aa8.73□□□□□ -1.01
HMGN1-205ENST00000419378 ADAMTSL1Q8N6G6 1762 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 FAM13AO94988 1023 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 CSF1RP07333 972 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 NPR3P17342 541 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 FOXO4P98177 505 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 C1orf53Q5VUE5 145 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 GPR101Q96P66 508 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-205ENST00000419378 TAF1DQ9H5J8 278 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-205ENST00000419378 ATP13A2Q9NQ11 1180 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 C9orf78Q9NZ63 289 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-205ENST00000419378 ANKIB1Q9P2G1 1089 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 HACL1Q9UJ83 578 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 XDHP47989 1333 aa8.72□□□□□ -1.01
HMGN1-205ENST00000419378 UFL1O94874 794 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 ITGA6P23229 1130 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 IGHMBP2P38935 993 aaKnown RBP8.71□□□□□ -1.02
HMGN1-205ENST00000419378 MARSP56192 900 aaKnown RBP8.71□□□□□ -1.02
HMGN1-205ENST00000419378 CXCL9Q07325 125 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 C11orf91Q3C1V1 193 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 WDR44Q5JSH3 913 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 FAM26DQ5JW98 314 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 EPHA10Q5JZY3 1008 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 EYA3Q99504 573 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 DBNDD1Q9H9R9 158 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 TIMMDC1Q9NPL8 285 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 BSDC1Q9NW68 430 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-205ENST00000419378 ZDHHC3Q9NYG2 299 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 GGA1Q9UJY5 639 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 MINPP1Q9UNW1 487 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 UTYO14607 1347 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 PCNTO95613 3336 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 A0A1B0GUL6 1792 aa8.71□□□□□ -1.02
HMGN1-205ENST00000419378 YDJCA8MPS7 323 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 ECE2O60344 883 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 RAD17O75943 681 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 NBPF7P0C2Y1 421 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-205ENST00000419378 EPHX2P34913 555 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 RARSP54136 660 aaKnown RBP8.7□□□□□ -1.02
HMGN1-205ENST00000419378 CIAPIN1Q6FI81 312 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 LMBR1LQ6UX01 489 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 LDHDQ86WU2 507 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 RHPN1Q8TCX5 695 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 KLRG1Q96E93 195 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 KAZALD1Q96I82 304 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 SUCLG2Q96I99 432 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 IRX2Q9BZI1 471 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-205ENST00000419378 ZC3H12CQ9C0D7 883 aaKnown RBP8.7□□□□□ -1.02
HMGN1-205ENST00000419378 MED23Q9ULK4 1368 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 SCN9AQ15858 1988 aa8.7□□□□□ -1.02
HMGN1-205ENST00000419378 ANKRD18BA2A2Z9 1011 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 ZBTB39O15060 712 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 ATP4AP20648 1035 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 BRD2P25440 801 aaKnown RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 EPS15P42566 896 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 EIF1AXP47813 144 aaKnown RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 GMPSP49915 693 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 CCT4P50991 539 aaKnown RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 IFIT5Q13325 482 aaKnown RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 TNIP1Q15025 636 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 EAPPQ56P03 285 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 NOM1Q5C9Z4 860 aaKnown RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 PNMA8AQ86V59 439 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 IFT43Q96FT9 208 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 MPHOSPH8Q99549 860 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms