RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SF3A1Q15459 793 aaKnown RBP4.15□□□□□ -1.75
VPS41-206ENST00000418457 CDH24Q86UP0 819 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 MCF2L2Q86YR7 1114 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 ZDHHC13Q8IUH4 622 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 RIN3Q8TB24 985 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 BAHD1Q8TBE0 780 aaPredicted RBP4.15□□□□□ -1.75
VPS41-206ENST00000418457 ANAPC16Q96DE5 110 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 TM9SF2Q99805 663 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 PRDM5Q9NQX1 630 aaPredicted RBP4.15□□□□□ -1.75
VPS41-206ENST00000418457 GTF2IRD1Q9UHL9 959 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 CEP131Q9UPN4 1083 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 LEMD3Q9Y2U8 911 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 MRVI1Q9Y6F6 885 aa4.15□□□□□ -1.75
VPS41-206ENST00000418457 EOMESO95936 686 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 CYP7A1P22680 504 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 GUCY2CP25092 1073 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 POLR2BP30876 1174 aaKnown RBP4.14□□□□□ -1.75
VPS41-206ENST00000418457 CCNFP41002 786 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 SFRP5Q5T4F7 317 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 INTS3Q68E01 1043 aaKnown RBP4.14□□□□□ -1.75
VPS41-206ENST00000418457 RUFY4Q6ZNE9 571 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 ARHGAP27Q6ZUM4 889 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 TAB3Q8N5C8 712 aaPredicted RBP4.14□□□□□ -1.75
VPS41-206ENST00000418457 DNAJB8Q8NHS0 232 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 PPP1R13LQ8WUF5 828 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 PIM2Q9P1W9 311 aa4.14□□□□□ -1.75
VPS41-206ENST00000418457 FAM86C2PA6NEL3 165 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 PRR19A6NJB7 356 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 IGF2BP3O00425 579 aaKnown RBP eCLIP4.13□□□□□ -1.75
VPS41-206ENST00000418457 CYP26A1O43174 497 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 STK10O94804 968 aaKnown RBP4.13□□□□□ -1.75
VPS41-206ENST00000418457 PPP2R5EQ16537 467 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 FAM214BQ7L5A3 538 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 FAM169BQ8N8A8 192 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 SREK1Q8WXA9 508 aaKnown RBP4.13□□□□□ -1.75
VPS41-206ENST00000418457 COX4I2Q96KJ9 171 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 HEXIM2Q96MH2 286 aaKnown RBP4.13□□□□□ -1.75
VPS41-206ENST00000418457 SLC9A7Q96T83 725 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.13□□□□□ -1.75
VPS41-206ENST00000418457 ZNF408Q9H9D4 720 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 LRRC4CQ9HCJ2 640 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 MAPK8IP1Q9UQF2 711 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 SLC12A7Q9Y666 1083 aa4.13□□□□□ -1.75
VPS41-206ENST00000418457 GNAT3A8MTJ3 354 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 SMAD7O15105 426 aaKnown RBP4.12□□□□□ -1.75
VPS41-206ENST00000418457 ADAM23O75077 832 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 CLEC3AO75596 197 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 UBOX5O94941 541 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 TGFB1P01137 390 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 ACRP10323 421 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 FOSL1P15407 271 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 ITGB7P26010 798 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 ETFBP38117 255 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 GRIK1P39086 918 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 TNNI3KQ59H18 835 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 UNC5AQ6ZN44 842 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 TTC6Q86TZ1 520 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 C19orf47Q8N9M1 422 aaKnown RBP4.12□□□□□ -1.75
VPS41-206ENST00000418457 FAM181AQ8N9Y4 354 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 RNF141Q8WVD5 230 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 DHRS1Q96LJ7 313 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 KREMEN1Q96MU8 473 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 SLC6A18Q96N87 628 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 PPP1R1BQ9UD71 204 aaPredicted RBP4.12□□□□□ -1.75
VPS41-206ENST00000418457 PRKAG3Q9UGI9 489 aa4.12□□□□□ -1.75
VPS41-206ENST00000418457 A0A1W2PQH9 124 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 CBX7O95931 251 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 CEACAM5P06731 702 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 ITIH2P19823 946 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 GTF2F1P35269 517 aaKnown RBP eCLIP4.11□□□□□ -1.75
VPS41-206ENST00000418457 KIR3DL1P43629 444 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 CASP7P55210 303 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 OXCT1P55809 520 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 RNF4P78317 190 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 ZYXQ15942 572 aaKnown RBP4.11□□□□□ -1.75
VPS41-206ENST00000418457 INTS5Q6P9B9 1019 aaKnown RBP4.11□□□□□ -1.75
VPS41-206ENST00000418457 C22orf34Q6ZV56 151 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 MFSD4AQ8N468 514 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 NETO1Q8TDF5 533 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 DRC1Q96MC2 740 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 ASPNQ9BXN1 380 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 MKNK2Q9HBH9 465 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 ACTR10Q9NZ32 417 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 RNF112Q9ULX5 631 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 R3HCC1Q9Y3T6 440 aaKnown RBP4.11□□□□□ -1.75
VPS41-206ENST00000418457 CNTNAP4Q9C0A0 1308 aa4.11□□□□□ -1.75
VPS41-206ENST00000418457 PRR33A8MZF0 331 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 FAM155AB1AL88 458 aaPredicted RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 COBLO75128 1261 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 ZNF865P0CJ78 1059 aaPredicted RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 HOXA10P31260 410 aaPredicted RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 PMS1P54277 932 aaKnown RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 BBS9Q3SYG4 887 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 NBPF12Q5TAG4 269 aaPredicted RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 ANKS3Q6ZW76 656 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 TMEM192Q8IY95 271 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 CKAP2LQ8IYA6 745 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 DHX38Q92620 1227 aaKnown RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 ARMC5Q96C12 935 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 ZNF512BQ96KM6 892 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms