RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CUL4BQ13620 913 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 ANKRD20A12PQ8NF67 263 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 ESR2Q92731 530 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 CHP1Q99653 195 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 MORC2Q9Y6X9 1032 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 FXR1P51114 621 aaKnown RBP eCLIP14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 RESP18Q5W5W9 173 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 SLC44A5Q8NCS7 719 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 LPIN2Q92539 896 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 ADAMTS3O15072 1205 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 KLRK1P26718 216 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 PIP4K2BP78356 416 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 CHRNDQ07001 517 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 TBC1D7Q9P0N9 293 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 SALL1Q9NSC2 1324 aa14.95□□□□□ -0.02
TNFRSF8-203ENST00000417814 PDE8AO60658 829 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 CRACR2BQ8N4Y2 399 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 TC2NQ8N9U0 490 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 TMEM87BQ96K49 555 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 TEX13AQ9BXU3 409 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 KRT23Q9C075 422 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 FAM107BQ9H098 131 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 FHOD1Q9Y613 1164 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 PARP3Q9Y6F1 533 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 TRIM66O15016 1216 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 TRIM21P19474 475 aaKnown RBP14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 KRT2P35908 639 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 STAT6P42226 847 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 ATL3Q6DD88 541 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 DYMQ7RTS9 669 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 WASF1Q92558 559 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 HSD3B7Q9H2F3 369 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 IPO7O95373 1038 aaKnown RBP14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 GPS2Q13227 327 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 TTC38Q5R3I4 469 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 GOLGA1Q92805 767 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 ISCA1Q9BUE6 129 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 SMARCAL1Q9NZC9 954 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 DACH1Q9UI36 760 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 NWD1Q149M9 1564 aa14.94□□□□□ -0.02
TNFRSF8-203ENST00000417814 MYO1BO43795 1136 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 DEXIO95424 95 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 UBA7P41226 1012 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 LETM2Q2VYF4 491 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 RILPL1Q5EBL4 403 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 TRIM65Q6PJ69 517 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 GOLGA6L1Q8N7Z2 621 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 MAP3K15Q6ZN16 1313 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 CCP110O43303 1012 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 LONRF2Q1L5Z9 754 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 INF2Q27J81 1249 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 ANKIB1Q9P2G1 1089 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 UTRNP46939 3433 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 CCDC196A0A1B0GTZ2 297 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 CCDC194A0A1B0GVG4 234 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 PSDA5PKW4 1024 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 UQCRFS1P1P0C7P4 283 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 MTIF2P46199 727 aaKnown RBP14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 SMCR8Q8TEV9 937 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 GJA10Q969M2 543 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 DEF6Q9H4E7 631 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 GNL3LQ9NVN8 582 aaKnown RBP14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 CALCOCO1Q9P1Z2 691 aa14.93□□□□□ -0.02
TNFRSF8-203ENST00000417814 RNF225M0QZC1 329 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 USP17L8P0C7I0 530 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 PROCA1Q8NCQ7 364 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 NELFBQ8WX92 580 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 MAP3K14Q99558 947 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 CTAGE9A4FU28 777 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 KCNQ2O43526 872 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 KLK7P49862 253 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 NTRK3Q16288 839 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 PAGE5Q96GU1 130 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 SLC4A9Q96Q91 983 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 ABCB6Q9NP58 842 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 MAGEC2Q9UBF1 373 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 FAN1Q9Y2M0 1017 aa14.92□□□□□ -0.02
TNFRSF8-203ENST00000417814 USP17L3A6NCW0 530 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 USP17L4A6NCW7 530 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 TADA3O75528 432 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 PRDX5P30044 214 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 DIXDC1Q155Q3 683 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 CAVIN4Q5BKX8 364 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 CCDC122Q5T0U0 273 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 USP17L1Q7RTZ2 530 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 ADGRL3Q9HAR2 1447 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 FBXO2Q9UK22 296 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 RGPD2P0DJD1 1756 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 XRN1Q8IZH2 1706 aaKnown RBP14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 CIAO1O76071 339 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 FMNL1O95466 1100 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 DZIP1Q86YF9 867 aaKnown RBP14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 AGXT2Q9BYV1 514 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 MMRN2Q9H8L6 949 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 FAM207AQ9NSI2 230 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 IRX3P78415 501 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 DPYDQ12882 1025 aa14.91□□□□□ -0.02
TNFRSF8-203ENST00000417814 ENAHQ8N8S7 591 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms