RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GUCY1A2P33402 732 aa19.41■□□□□ 0.7
SSBP3-205ENST00000417664 NOVP48745 357 aa19.41■□□□□ 0.7
SSBP3-205ENST00000417664 CEBPZQ03701 1054 aaKnown RBP19.41■□□□□ 0.7
SSBP3-205ENST00000417664 SLC44A5Q8NCS7 719 aa19.41■□□□□ 0.7
SSBP3-205ENST00000417664 DHX36Q9H2U1 1008 aaKnown RBP19.41■□□□□ 0.7
SSBP3-205ENST00000417664 TSPY26PQ9H489 355 aa19.41■□□□□ 0.7
SSBP3-205ENST00000417664 KCNQ5Q9NR82 932 aa19.41■□□□□ 0.7
SSBP3-205ENST00000417664 SCN9AQ15858 1988 aa19.41■□□□□ 0.7
SSBP3-205ENST00000417664 ZNF646O15015 1829 aaPredicted RBP19.41■□□□□ 0.7
SSBP3-205ENST00000417664 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 POLD1P28340 1107 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 PICALMQ13492 652 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 STK38Q15208 465 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 ANO1Q5XXA6 986 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 ADALQ6DHV7 355 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 KIAA0825Q8IV33 1275 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 NOSTRINQ8IVI9 506 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 CCDC82Q8N4S0 544 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 LZTS2Q9BRK4 669 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 IDI2Q9BXS1 227 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 NUP62CLQ9H1M0 184 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 EHD4Q9H223 541 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 SERPINB13Q9UIV8 391 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 CNTNAP5Q8WYK1 1306 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 MYH6P13533 1939 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 PLEKHA8P1O95397 391 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 LIG1P18858 919 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 ME1P48163 572 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 GRM4Q14833 912 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 PKN1Q16512 942 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 PPP4R3BQ5MIZ7 849 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 DIS3L2Q8IYB7 885 aaKnown RBP19.4■□□□□ 0.7
SSBP3-205ENST00000417664 FAM177A1Q8N128 213 aaPredicted RBP19.4■□□□□ 0.7
SSBP3-205ENST00000417664 JMYQ8N9B5 988 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 MTFR1LQ9H019 292 aa19.4■□□□□ 0.7
SSBP3-205ENST00000417664 DDX4Q9NQI0 724 aaKnown RBP19.4■□□□□ 0.7
SSBP3-205ENST00000417664 V9GY48 417 aaPredicted RBP19.4■□□□□ 0.7
SSBP3-205ENST00000417664 SPTLC2O15270 562 aa19.39■□□□□ 0.69
SSBP3-205ENST00000417664 SLC39A14Q15043 492 aa19.39■□□□□ 0.69
SSBP3-205ENST00000417664 SF3A1Q15459 793 aaKnown RBP19.39■□□□□ 0.69
SSBP3-205ENST00000417664 CMTR1Q8N1G2 835 aaKnown RBP19.39■□□□□ 0.69
SSBP3-205ENST00000417664 SRBD1Q8N5C6 995 aaKnown RBP19.39■□□□□ 0.69
SSBP3-205ENST00000417664 FTOQ9C0B1 505 aaKnown RBP eCLIP19.39■□□□□ 0.69
SSBP3-205ENST00000417664 DACT1Q9NYF0 836 aa19.39■□□□□ 0.69
SSBP3-205ENST00000417664 TOP1P11387 765 aaKnown RBP19.38■□□□□ 0.69
SSBP3-205ENST00000417664 RILPL1Q5EBL4 403 aa19.38■□□□□ 0.69
SSBP3-205ENST00000417664 ANP32BQ92688 251 aaKnown RBP19.38■□□□□ 0.69
SSBP3-205ENST00000417664 TMEM47Q9BQJ4 181 aa19.38■□□□□ 0.69
SSBP3-205ENST00000417664 BRMS1Q9HCU9 246 aa19.38■□□□□ 0.69
SSBP3-205ENST00000417664 PIM2Q9P1W9 311 aa19.38■□□□□ 0.69
SSBP3-205ENST00000417664 STX8Q9UNK0 236 aa19.38■□□□□ 0.69
SSBP3-205ENST00000417664 CLIC4Q9Y696 253 aa19.38■□□□□ 0.69
SSBP3-205ENST00000417664 PSME4Q14997 1843 aa19.38■□□□□ 0.69
SSBP3-205ENST00000417664 PPP6R2O75170 966 aa19.37■□□□□ 0.69
SSBP3-205ENST00000417664 CCDC73Q6ZRK6 1079 aa19.37■□□□□ 0.69
SSBP3-205ENST00000417664 PHF20Q9BVI0 1012 aa19.37■□□□□ 0.69
SSBP3-205ENST00000417664 CLSTN2Q9H4D0 955 aa19.37■□□□□ 0.69
SSBP3-205ENST00000417664 PCDHA7Q9UN72 937 aa19.37■□□□□ 0.69
SSBP3-205ENST00000417664 YDJCA8MPS7 323 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 BTBD18B2RXH4 712 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 UBE2Q2LH0YL09 131 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 CTAGE5O15320 804 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 SMARCA1P28370 1054 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 MAP3K11Q16584 847 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 TPRNQ4KMQ1 711 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 RBM43Q6ZSC3 357 aaKnown RBP19.36■□□□□ 0.69
SSBP3-205ENST00000417664 CCAR1Q8IX12 1150 aaKnown RBP19.36■□□□□ 0.69
SSBP3-205ENST00000417664 CCDC17Q96LX7 622 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 RBSNQ9H1K0 784 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 SH3GLB2Q9NR46 395 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.36■□□□□ 0.69
SSBP3-205ENST00000417664 SCG2P13521 617 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 RBM5P52756 815 aaKnown RBP eCLIP19.36■□□□□ 0.69
SSBP3-205ENST00000417664 FAM160A1Q05DH4 1040 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 PFKFB3Q16875 520 aaPredicted RBP19.36■□□□□ 0.69
SSBP3-205ENST00000417664 LARGE2Q8N3Y3 721 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 MRPS27Q92552 414 aaKnown RBP19.36■□□□□ 0.69
SSBP3-205ENST00000417664 TNMDQ9H2S6 317 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 MAD2L2Q9UI95 211 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 KCNJ14Q9UNX9 436 aa19.36■□□□□ 0.69
SSBP3-205ENST00000417664 MORC2Q9Y6X9 1032 aaPredicted RBP19.36■□□□□ 0.69
SSBP3-205ENST00000417664 PALM3A6NDB9 673 aaPredicted RBP19.35■□□□□ 0.69
SSBP3-205ENST00000417664 NR1I2O75469 434 aa19.35■□□□□ 0.69
SSBP3-205ENST00000417664 VIL1P09327 827 aaKnown RBP19.35■□□□□ 0.69
SSBP3-205ENST00000417664 KRT2P35908 639 aa19.35■□□□□ 0.69
SSBP3-205ENST00000417664 RSBN1LQ6PCB5 846 aaPredicted RBP19.35■□□□□ 0.69
SSBP3-205ENST00000417664 CEP95Q96GE4 821 aa19.35■□□□□ 0.69
SSBP3-205ENST00000417664 CCDC192P0DO97 292 aa19.34■□□□□ 0.69
SSBP3-205ENST00000417664 FUCA2Q9BTY2 467 aa19.34■□□□□ 0.69
SSBP3-205ENST00000417664 MTMR4Q9NYA4 1195 aa19.34■□□□□ 0.69
SSBP3-205ENST00000417664 PI4KBQ9UBF8 816 aa19.34■□□□□ 0.69
SSBP3-205ENST00000417664 COL2A1P02458 1487 aaPredicted RBP19.34■□□□□ 0.69
SSBP3-205ENST00000417664 IGKV6D-41A0A0C4DH26 115 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 ENTPD3O75355 529 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 CALML3P27482 149 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 NFIAQ12857 509 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 PTPAQ15257 358 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 ENGASEQ8NFI3 743 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms