RNA–Protein interactions for RNA: ENST00000417295.6

SH3GL1-202, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-202ENST00000417295 EMILIN3Q9NT22 766 aa34.13■■■■□ 3.05
SH3GL1-202ENST00000417295 TMOD4Q9NZQ9 345 aa34.13■■■■□ 3.05
SH3GL1-202ENST00000417295 CPA4Q9UI42 421 aa34.13■■■■□ 3.05
SH3GL1-202ENST00000417295 PTPRFP10586 1907 aa34.12■■■■□ 3.05
SH3GL1-202ENST00000417295 RASA1P20936 1047 aa34.12■■■■□ 3.05
SH3GL1-202ENST00000417295 PPARAQ07869 468 aa34.12■■■■□ 3.05
SH3GL1-202ENST00000417295 C17orf99Q6UX52 265 aa34.12■■■■□ 3.05
SH3GL1-202ENST00000417295 FEZ1Q99689 392 aa34.12■■■■□ 3.05
SH3GL1-202ENST00000417295 MKNK2Q9HBH9 465 aa34.12■■■■□ 3.05
SH3GL1-202ENST00000417295 CAP1Q01518 475 aa34.11■■■■□ 3.05
SH3GL1-202ENST00000417295 A0A1W2PRG0 241 aa34.1■■■■□ 3.05
SH3GL1-202ENST00000417295 ALX1Q15699 326 aa34.1■■■■□ 3.05
SH3GL1-202ENST00000417295 USP17L2Q6R6M4 530 aa34.1■■■■□ 3.05
SH3GL1-202ENST00000417295 CTU1Q7Z7A3 348 aaKnown RBP34.1■■■■□ 3.05
SH3GL1-202ENST00000417295 SIAH1Q8IUQ4 282 aa34.1■■■■□ 3.05
SH3GL1-202ENST00000417295 CD99L2Q8TCZ2 262 aa34.1■■■■□ 3.05
SH3GL1-202ENST00000417295 KIAA1683Q9H0B3 1180 aa34.1■■■■□ 3.05
SH3GL1-202ENST00000417295 PRDM1O75626 825 aa34.09■■■■□ 3.05
SH3GL1-202ENST00000417295 FGAP02671 866 aa34.09■■■■□ 3.05
SH3GL1-202ENST00000417295 GNL3Q9BVP2 549 aaKnown RBP eCLIP34.09■■■■□ 3.05
SH3GL1-202ENST00000417295 MCOLN1Q9GZU1 580 aa34.09■■■■□ 3.05
SH3GL1-202ENST00000417295 IL25Q9H293 177 aa34.08■■■■□ 3.05
SH3GL1-202ENST00000417295 ERO1AQ96HE7 468 aa34.07■■■■□ 3.04
SH3GL1-202ENST00000417295 C12orf42Q96LP6 360 aa34.07■■■■□ 3.04
SH3GL1-202ENST00000417295 LOC285556D6RIA3 1793 aa34.06■■■■□ 3.04
SH3GL1-202ENST00000417295 MFAP1P55081 439 aaKnown RBP34.06■■■■□ 3.04
SH3GL1-202ENST00000417295 ICA1Q05084 483 aa34.06■■■■□ 3.04
SH3GL1-202ENST00000417295 CTDSPL2Q05D32 466 aa34.06■■■■□ 3.04
SH3GL1-202ENST00000417295 ASCC2Q9H1I8 757 aaPredicted RBP34.06■■■■□ 3.04
SH3GL1-202ENST00000417295 PABPC4Q13310 644 aaKnown RBP eCLIP34.05■■■■□ 3.04
SH3GL1-202ENST00000417295 SMCR8Q8TEV9 937 aaPredicted RBP34.05■■■■□ 3.04
SH3GL1-202ENST00000417295 ZNF287Q9HBT7 754 aa34.05■■■■□ 3.04
SH3GL1-202ENST00000417295 PNMA3Q9UL41 463 aa34.05■■■■□ 3.04
SH3GL1-202ENST00000417295 HOXA7P31268 230 aaPredicted RBP34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 USP14P54578 494 aa34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 INCENPQ9NQS7 918 aa34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 TACC3Q9Y6A5 838 aa34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 SLC3A2P08195 630 aaKnown RBP34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 BCRP11274 1271 aa34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 CHMLP26374 656 aa34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 PDE4BQ07343 736 aa34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 ZNF444Q8N0Y2 327 aaPredicted RBP34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 KANSL2Q9H9L4 492 aa34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 ANAPC4Q9UJX5 808 aa34.04■■■■□ 3.04
SH3GL1-202ENST00000417295 OSBPP22059 807 aa34.03■■■■□ 3.04
SH3GL1-202ENST00000417295 OTOP1Q7RTM1 612 aa34.03■■■■□ 3.04
SH3GL1-202ENST00000417295 ARHGAP39Q9C0H5 1083 aa34.03■■■■□ 3.04
SH3GL1-202ENST00000417295 TRIM17Q9Y577 477 aa34.03■■■■□ 3.04
SH3GL1-202ENST00000417295 EEF2P13639 858 aaKnown RBP34.02■■■■□ 3.04
SH3GL1-202ENST00000417295 VCAM1P19320 739 aa34.02■■■■□ 3.04
SH3GL1-202ENST00000417295 LACTBP83111 547 aaPredicted RBP34.02■■■■□ 3.04
SH3GL1-202ENST00000417295 ARHGEF10LQ9HCE6 1279 aa34.02■■■■□ 3.04
SH3GL1-202ENST00000417295 DDX52Q9Y2R4 599 aaKnown RBP eCLIP34.02■■■■□ 3.042e-8■■■■□ 21
SH3GL1-202ENST00000417295 ZMYM6O95789 1325 aa34.02■■■■□ 3.04
SH3GL1-202ENST00000417295 ECM2O94769 699 aaPredicted RBP34.01■■■■□ 3.03
SH3GL1-202ENST00000417295 IRX3P78415 501 aaPredicted RBP34.01■■■■□ 3.03
SH3GL1-202ENST00000417295 KIAA1755Q5JYT7 1200 aa34.01■■■■□ 3.03
SH3GL1-202ENST00000417295 TMX2Q9Y320 296 aa34.01■■■■□ 3.03
SH3GL1-202ENST00000417295 ATP2B2Q01814 1243 aa34■■■■□ 3.03
SH3GL1-202ENST00000417295 P2RX7Q99572 595 aaKnown RBP34■■■■□ 3.03
SH3GL1-202ENST00000417295 CTGFP29279 349 aa33.99■■■■□ 3.03
SH3GL1-202ENST00000417295 HAND2P61296 217 aa33.99■■■■□ 3.03
SH3GL1-202ENST00000417295 FAM47AQ5JRC9 791 aa33.99■■■■□ 3.03
SH3GL1-202ENST00000417295 ANKRD13CQ8N6S4 541 aa33.99■■■■□ 3.03
SH3GL1-202ENST00000417295 EFCC1Q9HA90 598 aa33.99■■■■□ 3.03
SH3GL1-202ENST00000417295 IGKV6D-41A0A0C4DH26 115 aa33.98■■■■□ 3.03
SH3GL1-202ENST00000417295 ABHD8Q96I13 439 aa33.98■■■■□ 3.03
SH3GL1-202ENST00000417295 PKN2Q16513 984 aaKnown RBP33.97■■■■□ 3.03
SH3GL1-202ENST00000417295 DSCC1Q9BVC3 393 aa33.97■■■■□ 3.03
SH3GL1-202ENST00000417295 RPAP3Q9H6T3 665 aaPredicted RBP33.97■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L15C9J2P7 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L13C9JLJ4 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L11C9JVI0 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L18D6R9N7 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L22D6RA61 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L17D6RBQ6 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L19D6RCP7 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L20D6RJB6 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 TFAP4Q01664 338 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 USP17L24Q0WX57 530 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 NBPF3Q9H094 633 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 VCPKMTQ9H867 229 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 MYH8P13535 1937 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 RAD50Q92878 1312 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 TSPY3P0CV98 308 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 TSPY8P0CW00 308 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 GCLCP48506 637 aaPredicted RBP33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 HERVK_113P62684 666 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 KIF22Q14807 665 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 CATSPERGQ6ZRH7 1159 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 SPICE1Q8N0Z3 855 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 NEDD1Q8NHV4 660 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 CEP95Q96GE4 821 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 SH2D4AQ9H788 454 aa33.96■■■■□ 3.03
SH3GL1-202ENST00000417295 FGRP09769 529 aa33.95■■■■□ 3.02
SH3GL1-202ENST00000417295 ERICH6BQ5W0A0 696 aa33.95■■■■□ 3.02
SH3GL1-202ENST00000417295 RUFY2Q8WXA3 655 aa33.95■■■■□ 3.02
SH3GL1-202ENST00000417295 PPP4R2Q9NY27 417 aa33.95■■■■□ 3.02
SH3GL1-202ENST00000417295 NYAP2Q9P242 653 aa33.95■■■■□ 3.02
SH3GL1-202ENST00000417295 PEX10O60683 326 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms