RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 TMOD4Q9NZQ9 345 aa22.81■■□□□ 1.24
CCDC148-204ENST00000417066 TAOK2Q9UL54 1235 aa22.81■■□□□ 1.24
CCDC148-204ENST00000417066 ROBO3Q96MS0 1386 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 CCDC171Q6TFL3 1326 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 ADGRA2Q96PE1 1338 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 A0A1W2PRG0 241 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 HSPD1P10809 573 aaKnown RBP22.8■■□□□ 1.24
CCDC148-204ENST00000417066 RASA1P20936 1047 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 C17orf99Q6UX52 265 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 CTU1Q7Z7A3 348 aaKnown RBP22.8■■□□□ 1.24
CCDC148-204ENST00000417066 SIAH1Q8IUQ4 282 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 CCDC17Q96LX7 622 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 PARK7Q99497 189 aaKnown RBP22.8■■□□□ 1.24
CCDC148-204ENST00000417066 FEZ1Q99689 392 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 MKNK2Q9HBH9 465 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 SLC45A1Q9Y2W3 748 aa22.8■■□□□ 1.24
CCDC148-204ENST00000417066 PPARAQ07869 468 aa22.79■■□□□ 1.24
CCDC148-204ENST00000417066 IL25Q9H293 177 aa22.79■■□□□ 1.24
CCDC148-204ENST00000417066 INCENPQ9NQS7 918 aa22.79■■□□□ 1.24
CCDC148-204ENST00000417066 FGAP02671 866 aa22.78■■□□□ 1.24
CCDC148-204ENST00000417066 CTDSPL2Q05D32 466 aa22.78■■□□□ 1.24
CCDC148-204ENST00000417066 USP17L2Q6R6M4 530 aa22.78■■□□□ 1.24
CCDC148-204ENST00000417066 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCDC148-204ENST00000417066 ARHGAP39Q9C0H5 1083 aa22.78■■□□□ 1.24
CCDC148-204ENST00000417066 HIP1O00291 1037 aa22.77■■□□□ 1.24
CCDC148-204ENST00000417066 ERO1AQ96HE7 468 aa22.77■■□□□ 1.24
CCDC148-204ENST00000417066 KIAA1683Q9H0B3 1180 aa22.77■■□□□ 1.24
CCDC148-204ENST00000417066 ASCC2Q9H1I8 757 aaPredicted RBP22.77■■□□□ 1.24
CCDC148-204ENST00000417066 TACC3Q9Y6A5 838 aa22.77■■□□□ 1.24
CCDC148-204ENST00000417066 MYH8P13535 1937 aa22.77■■□□□ 1.24
CCDC148-204ENST00000417066 LOC285556D6RIA3 1793 aa22.76■■□□□ 1.23
CCDC148-204ENST00000417066 ICA1Q05084 483 aa22.76■■□□□ 1.23
CCDC148-204ENST00000417066 ALX1Q15699 326 aa22.76■■□□□ 1.23
CCDC148-204ENST00000417066 SMCR8Q8TEV9 937 aaPredicted RBP22.76■■□□□ 1.23
CCDC148-204ENST00000417066 TRIM17Q9Y577 477 aa22.76■■□□□ 1.23
CCDC148-204ENST00000417066 BCRP11274 1271 aa22.75■■□□□ 1.23
CCDC148-204ENST00000417066 KIAA1755Q5JYT7 1200 aa22.75■■□□□ 1.23
CCDC148-204ENST00000417066 OTOP1Q7RTM1 612 aa22.75■■□□□ 1.23
CCDC148-204ENST00000417066 OSBPP22059 807 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 CTGFP29279 349 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 HOXA7P31268 230 aaPredicted RBP22.74■■□□□ 1.23
CCDC148-204ENST00000417066 USP14P54578 494 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 LACTBP83111 547 aaPredicted RBP22.74■■□□□ 1.23
CCDC148-204ENST00000417066 ATP2B2Q01814 1243 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 PABPC4Q13310 644 aaKnown RBP eCLIP22.74■■□□□ 1.23
CCDC148-204ENST00000417066 ZNF444Q8N0Y2 327 aaPredicted RBP22.74■■□□□ 1.23
CCDC148-204ENST00000417066 ABHD8Q96I13 439 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 C12orf42Q96LP6 360 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 PNMA3Q9UL41 463 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 PEX10O60683 326 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 EEF2P13639 858 aaKnown RBP22.74■■□□□ 1.23
CCDC148-204ENST00000417066 CHMLP26374 656 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 FAM47AQ5JRC9 791 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 ANKRD13CQ8N6S4 541 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 P2RX7Q99572 595 aaKnown RBP22.74■■□□□ 1.23
CCDC148-204ENST00000417066 KANSL2Q9H9L4 492 aa22.74■■□□□ 1.23
CCDC148-204ENST00000417066 SLC3A2P08195 630 aaKnown RBP22.73■■□□□ 1.23
CCDC148-204ENST00000417066 VCAM1P19320 739 aa22.73■■□□□ 1.23
CCDC148-204ENST00000417066 MFAP1P55081 439 aaKnown RBP22.73■■□□□ 1.23
CCDC148-204ENST00000417066 HAND2P61296 217 aa22.73■■□□□ 1.23
CCDC148-204ENST00000417066 IRX3P78415 501 aaPredicted RBP22.73■■□□□ 1.23
CCDC148-204ENST00000417066 PDE4BQ07343 736 aa22.73■■□□□ 1.23
CCDC148-204ENST00000417066 EFCC1Q9HA90 598 aa22.73■■□□□ 1.23
CCDC148-204ENST00000417066 ZNF287Q9HBT7 754 aa22.73■■□□□ 1.23
CCDC148-204ENST00000417066 ARHGEF10LQ9HCE6 1279 aa22.72■■□□□ 1.23
CCDC148-204ENST00000417066 ANAPC4Q9UJX5 808 aa22.72■■□□□ 1.23
CCDC148-204ENST00000417066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.72■■□□□ 1.23
CCDC148-204ENST00000417066 TMX2Q9Y320 296 aa22.72■■□□□ 1.23
CCDC148-204ENST00000417066 ZSWIM8A7E2V4 1837 aa22.72■■□□□ 1.23
CCDC148-204ENST00000417066 CAPN15O75808 1086 aa22.71■■□□□ 1.23
CCDC148-204ENST00000417066 POTEEQ6S8J3 1075 aa22.71■■□□□ 1.23
CCDC148-204ENST00000417066 SPICE1Q8N0Z3 855 aa22.71■■□□□ 1.23
CCDC148-204ENST00000417066 RPAP3Q9H6T3 665 aaPredicted RBP22.71■■□□□ 1.23
CCDC148-204ENST00000417066 IGKV6D-41A0A0C4DH26 115 aa22.7■■□□□ 1.22
CCDC148-204ENST00000417066 PSMC4P43686 418 aa22.7■■□□□ 1.22
CCDC148-204ENST00000417066 TFAP4Q01664 338 aa22.7■■□□□ 1.22
CCDC148-204ENST00000417066 KIF22Q14807 665 aa22.7■■□□□ 1.22
CCDC148-204ENST00000417066 CATSPERGQ6ZRH7 1159 aa22.7■■□□□ 1.22
CCDC148-204ENST00000417066 NBPF3Q9H094 633 aa22.7■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L15C9J2P7 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L13C9JLJ4 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L11C9JVI0 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L18D6R9N7 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L22D6RA61 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L17D6RBQ6 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L19D6RCP7 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L20D6RJB6 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 TSPY3P0CV98 308 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 TSPY8P0CW00 308 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 HERVK_113P62684 666 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 USP17L24Q0WX57 530 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 PKN2Q16513 984 aaKnown RBP22.69■■□□□ 1.22
CCDC148-204ENST00000417066 NEDD1Q8NHV4 660 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 CEP95Q96GE4 821 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 TRIM47Q96LD4 638 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 TXNRD2Q9NNW7 524 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 CLIP2Q9UDT6 1046 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 ZMYM6O95789 1325 aa22.69■■□□□ 1.22
CCDC148-204ENST00000417066 GCLCP48506 637 aaPredicted RBP22.68■■□□□ 1.22
CCDC148-204ENST00000417066 FBXO46Q6PJ61 603 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms