RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 ZNF827Q17R98 1081 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 WDR66Q8TBY9 1149 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 SH3RF3Q8TEJ3 882 aaPredicted RBP11.4□□□□□ -0.58
LINC00494-201ENST00000416742 SRPRBQ9Y5M8 271 aaKnown RBP11.4□□□□□ -0.58
LINC00494-201ENST00000416742 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.58
LINC00494-201ENST00000416742 ORC4O43929 436 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 NEMFO60524 1076 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 FGRP09769 529 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 PTPN21Q16825 1174 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 TGFBRAP1Q8WUH2 860 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 GJD4Q96KN9 370 aaPredicted RBP11.4□□□□□ -0.58
LINC00494-201ENST00000416742 PHF20Q9BVI0 1012 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 SAP30BPQ9UHR5 308 aaKnown RBP11.4□□□□□ -0.58
LINC00494-201ENST00000416742 MYH13Q9UKX3 1938 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 DDAH1O94760 285 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.58
LINC00494-201ENST00000416742 MYL5Q02045 173 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 POSTNQ15063 836 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 DHX58Q96C10 678 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 KAT14Q9H8E8 782 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 LEMD3Q9Y2U8 911 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 AFMP43652 599 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 UBASH3AP57075 661 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 CFAP100Q494V2 611 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 SMARCE1Q969G3 411 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 EPSTI1Q96J88 318 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 FANCLQ9NW38 375 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 USP27XA6NNY8 438 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 IKBKBO14920 756 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 UFL1O94874 794 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 ZNF804AQ7Z570 1209 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 MAPKAPK5Q8IW41 473 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 ECM29Q5VYK3 1845 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 XDHP47989 1333 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 WNT7AO00755 349 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 BAG3O95817 575 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 GSDMDP57764 484 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 SBK1Q52WX2 424 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 PRR5LQ6MZQ0 368 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 AMOTL1Q8IY63 956 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 ZNF444Q8N0Y2 327 aaPredicted RBP11.39□□□□□ -0.59
LINC00494-201ENST00000416742 SLC44A5Q8NCS7 719 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 MAN1B1Q9UKM7 699 aa11.39□□□□□ -0.59
LINC00494-201ENST00000416742 CDK11BP21127 795 aaKnown RBP11.38□□□□□ -0.59
LINC00494-201ENST00000416742 GPSM2P81274 684 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 CCZ1BP86790 482 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 CCZ1P86791 482 aaPredicted RBP11.38□□□□□ -0.59
LINC00494-201ENST00000416742 PIK3AP1Q6ZUJ8 805 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 SEPT12Q8IYM1 358 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 DPF2Q92785 391 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 BTAF1O14981 1849 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 PDS5AQ29RF7 1337 aaKnown RBP11.38□□□□□ -0.59
LINC00494-201ENST00000416742 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 BMP6P22004 513 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 TTC38Q5R3I4 469 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 C12orf60Q5U649 245 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 STX8Q9UNK0 236 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 DUOX1Q9NRD9 1551 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 VWA3AA6NCI4 1184 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 SERPINB2P05120 415 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 SCG2P13521 617 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
LINC00494-201ENST00000416742 CASP1P29466 404 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 KIF5BP33176 963 aa11.38□□□□□ -0.59
LINC00494-201ENST00000416742 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
LINC00494-201ENST00000416742 TRMT44Q8IYL2 757 aaKnown RBP11.38□□□□□ -0.59
LINC00494-201ENST00000416742 MYH6P13533 1939 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 LDHCP07864 332 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 GSTO1P78417 241 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 RCSD1Q6JBY9 416 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 ZNF579Q8NAF0 562 aaKnown RBP11.37□□□□□ -0.59
LINC00494-201ENST00000416742 PNMA1Q8ND90 353 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 STAMQ92783 540 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 PTGDRQ13258 359 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 PTPN14Q15678 1187 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 STAG2Q8N3U4 1231 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 GPKOWQ92917 476 aaPredicted RBP eCLIP11.37□□□□□ -0.59
LINC00494-201ENST00000416742 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
LINC00494-201ENST00000416742 AFF2P51816 1311 aa11.37□□□□□ -0.59
LINC00494-201ENST00000416742 C6orf229H3BNL8 230 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 MCM7P33993 719 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 KLHL10Q6JEL2 608 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 ARMCX5Q6P1M9 558 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
LINC00494-201ENST00000416742 HSD3B7Q9H2F3 369 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 CD209Q9NNX6 404 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 IL17RBQ9NRM6 502 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 CBFA2T2O43439 604 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 NRDCO43847 1150 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 PLCD1P51178 756 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 ST5P78524 1137 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 CEP135Q66GS9 1140 aa11.36□□□□□ -0.59
LINC00494-201ENST00000416742 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms