RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 USP17L15C9J2P7 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 USP17L13C9JLJ4 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 USP17L11C9JVI0 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 USP17L18D6R9N7 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 USP17L22D6RA61 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 USP17L17D6RBQ6 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 USP17L19D6RCP7 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 USP17L20D6RJB6 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 GOLIM4O00461 696 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 PRKAR2AP13861 404 aaKnown RBP17.5■□□□□ 0.39
PAF1-202ENST00000416728 USP17L24Q0WX57 530 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 Q3C1V9 767 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 GPR142Q7Z601 462 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 TRMT44Q8IYL2 757 aaKnown RBP17.5■□□□□ 0.39
PAF1-202ENST00000416728 DOCK3Q8IZD9 2030 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.5■□□□□ 0.39
PAF1-202ENST00000416728 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 COG6Q9Y2V7 657 aa17.5■□□□□ 0.39
PAF1-202ENST00000416728 TRIOBPQ9H2D6 2365 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 ZNF532Q9HCE3 1301 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
PAF1-202ENST00000416728 VCAM1P19320 739 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 SHMT1P34896 483 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 RGS2P41220 211 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 MAP3K21Q5TCX8 1036 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 POTEEQ6S8J3 1075 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 PLEKHH3Q7Z736 793 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 ACER1Q8TDN7 264 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 ZBTB40Q9NUA8 1239 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 MCM9Q9NXL9 1143 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 RABGAP1Q9Y3P9 1069 aa17.49■□□□□ 0.39
PAF1-202ENST00000416728 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
PAF1-202ENST00000416728 CCNA1P78396 465 aa17.48■□□□□ 0.39
PAF1-202ENST00000416728 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
PAF1-202ENST00000416728 PRO3102Q9H379 93 aa17.48■□□□□ 0.39
PAF1-202ENST00000416728 GABPAQ06546 454 aa17.47■□□□□ 0.39
PAF1-202ENST00000416728 MORN1Q5T089 497 aa17.47■□□□□ 0.39
PAF1-202ENST00000416728 CATSPERGQ6ZRH7 1159 aa17.47■□□□□ 0.39
PAF1-202ENST00000416728 SIRT2Q8IXJ6 389 aa17.47■□□□□ 0.39
PAF1-202ENST00000416728 USP6NLQ92738 828 aa17.47■□□□□ 0.39
PAF1-202ENST00000416728 APBA2Q99767 749 aa17.47■□□□□ 0.39
PAF1-202ENST00000416728 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
PAF1-202ENST00000416728 OGDHLQ9ULD0 1010 aa17.47■□□□□ 0.39
PAF1-202ENST00000416728 MYH1P12882 1939 aa17.46■□□□□ 0.39
PAF1-202ENST00000416728 TCRBV5S4A2TA0A5A2 114 aa17.46■□□□□ 0.39
PAF1-202ENST00000416728 MPHOSPH10O00566 681 aaKnown RBP17.46■□□□□ 0.39
PAF1-202ENST00000416728 CNMDO75829 334 aa17.46■□□□□ 0.39
PAF1-202ENST00000416728 GLRX3O76003 335 aaKnown RBP17.46■□□□□ 0.39
PAF1-202ENST00000416728 SEPT2Q15019 361 aa17.46■□□□□ 0.39
PAF1-202ENST00000416728 WDR78Q5VTH9 848 aa17.46■□□□□ 0.39
PAF1-202ENST00000416728 LCORLQ8N3X6 602 aa17.46■□□□□ 0.39
PAF1-202ENST00000416728 SDR42E1Q8WUS8 393 aa17.46■□□□□ 0.39
PAF1-202ENST00000416728 EDC3Q96F86 508 aaKnown RBP17.46■□□□□ 0.39
PAF1-202ENST00000416728 RPAP3Q9H6T3 665 aaPredicted RBP17.46■□□□□ 0.39
PAF1-202ENST00000416728 DCP1AQ9NPI6 582 aaPredicted RBP17.46■□□□□ 0.39
PAF1-202ENST00000416728 GUCY1A2P33402 732 aa17.45■□□□□ 0.38
PAF1-202ENST00000416728 CACNB2Q08289 660 aaPredicted RBP17.45■□□□□ 0.38
PAF1-202ENST00000416728 MAP2K5Q13163 448 aa17.45■□□□□ 0.38
PAF1-202ENST00000416728 CCL14Q16627 93 aa17.45■□□□□ 0.38
PAF1-202ENST00000416728 LBX2Q6XYB7 198 aa17.45■□□□□ 0.38
PAF1-202ENST00000416728 C7orf61Q8IZ16 206 aa17.45■□□□□ 0.38
PAF1-202ENST00000416728 C11orf49Q9H6J7 331 aa17.45■□□□□ 0.38
PAF1-202ENST00000416728 PAG1Q9NWQ8 432 aa17.45■□□□□ 0.38
PAF1-202ENST00000416728 PLXNB2O15031 1838 aa17.45■□□□□ 0.38
PAF1-202ENST00000416728 A0A1W2PPC1 479 aa17.44■□□□□ 0.38
PAF1-202ENST00000416728 MNX1P50219 401 aaPredicted RBP17.44■□□□□ 0.38
PAF1-202ENST00000416728 EVX2Q03828 476 aa17.44■□□□□ 0.38
PAF1-202ENST00000416728 BOLA2Q9H3K6 86 aa17.44■□□□□ 0.38
PAF1-202ENST00000416728 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
PAF1-202ENST00000416728 DDX60LQ5H9U9 1706 aaKnown RBP17.44■□□□□ 0.38
PAF1-202ENST00000416728 SPDYE16A6NNV3 312 aaPredicted RBP17.43■□□□□ 0.38
PAF1-202ENST00000416728 ATP5JP18859 108 aa17.43■□□□□ 0.38
PAF1-202ENST00000416728 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.43■□□□□ 0.38
PAF1-202ENST00000416728 BTBD7Q9P203 1132 aa17.43■□□□□ 0.38
PAF1-202ENST00000416728 STAP2Q9UGK3 403 aa17.43■□□□□ 0.38
PAF1-202ENST00000416728 SWAP70Q9UH65 585 aa17.43■□□□□ 0.38
PAF1-202ENST00000416728 RCAN3Q9UKA8 241 aa17.43■□□□□ 0.38
PAF1-202ENST00000416728 IVNS1ABPQ9Y6Y0 642 aa17.43■□□□□ 0.38
PAF1-202ENST00000416728 A0A1W2PRG0 241 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 SLC15A5A6NIM6 579 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 MBD4O95243 580 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 CYP2D6P10635 497 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 PTPREP23469 700 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
PAF1-202ENST00000416728 ADD2P35612 726 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 TMEM179Q6ZVK1 233 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 SLC44A5Q8NCS7 719 aa17.42■□□□□ 0.38
PAF1-202ENST00000416728 HAUS7Q99871 368 aa17.41■□□□□ 0.38
PAF1-202ENST00000416728 TANGO6Q9C0B7 1094 aa17.41■□□□□ 0.38
PAF1-202ENST00000416728 ATP8A2Q9NTI2 1148 aa17.41■□□□□ 0.38
PAF1-202ENST00000416728 HOXC10Q9NYD6 342 aa17.41■□□□□ 0.38
PAF1-202ENST00000416728 ZMYND8Q9ULU4 1186 aaPredicted RBP17.41■□□□□ 0.38
PAF1-202ENST00000416728 RANBP2P49792 3224 aaKnown RBP17.41■□□□□ 0.38
PAF1-202ENST00000416728 NAV1Q8NEY1 1877 aa17.41■□□□□ 0.38
PAF1-202ENST00000416728 PRKAB2O43741 272 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 GRB14Q14449 540 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 COG2Q14746 738 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 SLFNL1Q499Z3 407 aa17.4■□□□□ 0.38
PAF1-202ENST00000416728 LHX8Q68G74 356 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms