RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 FBXO41Q8TF61 875 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
PHRF1-203ENST00000416188 COMMD10Q9Y6G5 202 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 SLU7O95391 586 aaKnown RBP17.5■□□□□ 0.39
PHRF1-203ENST00000416188 IKBKGQ9Y6K9 419 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 ZMYM4Q5VZL5 1548 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 BICDL2A1A5D9 508 aa17.5■□□□□ 0.39
PHRF1-203ENST00000416188 BBXQ8WY36 941 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-203ENST00000416188 CEP170BQ9Y4F5 1589 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-203ENST00000416188 A0A0G2JLW4 131 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 DTNBO60941 627 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 KRT222Q8N1A0 295 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 HARSP12081 509 aaKnown RBP17.49■□□□□ 0.39
PHRF1-203ENST00000416188 CHRNA5P30532 468 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 GJC1P36383 396 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 AOC3Q16853 763 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 NEK11Q8NG66 645 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 IQCA1LA6NCM1 817 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 GNPTABQ3T906 1256 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 GLG1Q92896 1179 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 FERMT1Q9BQL6 677 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 SNX14Q9Y5W7 946 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 ATP10DQ9P241 1426 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
PHRF1-203ENST00000416188 UNC13BO14795 1591 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-203ENST00000416188 CCDC155Q8N6L0 562 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 ZBTB9Q96C00 473 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 ZFP91Q96JP5 570 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-203ENST00000416188 BRIP1Q9BX63 1249 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 MLXIPQ9HAP2 919 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 ABCA6Q8N139 1617 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 USP14P54578 494 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 ARHGEF16Q5VV41 709 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 SPECC1LQ69YQ0 1117 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 PIK3AP1Q6ZUJ8 805 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 NLRX1Q86UT6 975 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 CAPZA3Q96KX2 299 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 LUC7L2Q9Y383 392 aaKnown RBP17.48■□□□□ 0.39
PHRF1-203ENST00000416188 SPHKAPQ2M3C7 1700 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 SSH2Q76I76 1423 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 FAM160A1Q05DH4 1040 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 CCT6AP40227 531 aaKnown RBP17.48■□□□□ 0.39
PHRF1-203ENST00000416188 MIGA2Q7L4E1 593 aa17.48■□□□□ 0.39
PHRF1-203ENST00000416188 MYCP01106 439 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-203ENST00000416188 MYL5Q02045 173 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 GIMAP7Q8NHV1 300 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 SGSM2O43147 1006 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 TRIM6Q9C030 488 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-203ENST00000416188 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-203ENST00000416188 TESPA1A2RU30 521 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-203ENST00000416188 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 CCNT1O60563 726 aaKnown RBP17.47■□□□□ 0.39
PHRF1-203ENST00000416188 ATP2C2O75185 946 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 STAMBPO95630 424 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 DSCC1Q9BVC3 393 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 DNM2P50570 870 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 PPP2R5BQ15173 497 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 ZNF569Q5MCW4 686 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 SYT10Q6XYQ8 523 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 HAUS7Q99871 368 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 PNMA2Q9UL42 364 aa17.47■□□□□ 0.39
PHRF1-203ENST00000416188 CCDC169A6NNP5 214 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 TMEM110-MUSTN1A8MSY1 372 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 ATL3Q6DD88 541 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 DPH6Q7L8W6 267 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 SPICE1Q8N0Z3 855 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 IFT74Q96LB3 600 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 PSMD1Q99460 953 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 ATP8A2Q9NTI2 1148 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 ELP1O95163 1332 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 ECE2O60344 883 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 GDF11O95390 407 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 SRRTQ9BXP5 876 aaKnown RBP17.46■□□□□ 0.39
PHRF1-203ENST00000416188 MRPL11Q9Y3B7 192 aaKnown RBP17.46■□□□□ 0.39
PHRF1-203ENST00000416188 A0A1W2PRG0 241 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 ARID4AP29374 1257 aaPredicted RBP17.46■□□□□ 0.39
PHRF1-203ENST00000416188 NONOQ15233 471 aaKnown RBP eCLIP17.46■□□□□ 0.393e-7■■■■□ 23.5
PHRF1-203ENST00000416188 HAUS3Q68CZ6 603 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 GPR108Q9NPR9 543 aa17.46■□□□□ 0.39
PHRF1-203ENST00000416188 EEF2P13639 858 aaKnown RBP17.45■□□□□ 0.38
PHRF1-203ENST00000416188 PRPHP41219 470 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 SMTNP53814 917 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 SPOUT1Q5T280 376 aaKnown RBP17.45■□□□□ 0.38
PHRF1-203ENST00000416188 NCAPH2Q6IBW4 605 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 PPP1R14CQ8TAE6 165 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 SWAP70Q9UH65 585 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 MYO3BQ8WXR4 1341 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 KIF4AO95239 1232 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 ADAMTS13Q76LX8 1427 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 DIXDC1Q155Q3 683 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 GOLGA1Q92805 767 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms