RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 LRRN4CLQ8ND94 238 aa15.21■□□□□ 0.03
CSTF2-203ENST00000415585 SPATA20Q8TB22 786 aa15.21■□□□□ 0.03
CSTF2-203ENST00000415585 MED15Q96RN5 788 aa15.21■□□□□ 0.03
CSTF2-203ENST00000415585 ZSCAN10Q96SZ4 725 aaPredicted RBP15.21■□□□□ 0.03
CSTF2-203ENST00000415585 GNL3LQ9NVN8 582 aaKnown RBP15.21■□□□□ 0.03
CSTF2-203ENST00000415585 DNAI1Q9UI46 699 aa15.21■□□□□ 0.03
CSTF2-203ENST00000415585 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSTF2-203ENST00000415585 SCN7AQ01118 1682 aa15.21■□□□□ 0.03
CSTF2-203ENST00000415585 WTIPA6NIX2 430 aaPredicted RBP15.21■□□□□ 0.03
CSTF2-203ENST00000415585 ARHGAP6O43182 974 aa15.21■□□□□ 0.03
CSTF2-203ENST00000415585 XBP1P17861 261 aa15.21■□□□□ 0.03
CSTF2-203ENST00000415585 CDK11BP21127 795 aaKnown RBP15.21■□□□□ 0.03
CSTF2-203ENST00000415585 PHF20Q9BVI0 1012 aa15.21■□□□□ 0.03
CSTF2-203ENST00000415585 AATFQ9NY61 560 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSTF2-203ENST00000415585 CYP2D7A0A087X1C5 515 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 PRPF3O43395 683 aaKnown RBP15.2■□□□□ 0.02
CSTF2-203ENST00000415585 KRT2P35908 639 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 DYNLL1P63167 89 aaKnown RBP15.2■□□□□ 0.02
CSTF2-203ENST00000415585 ERCC6LQ2NKX8 1250 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 EARS2Q5JPH6 523 aaKnown RBP15.2■□□□□ 0.02
CSTF2-203ENST00000415585 FAM182BQ5T319 152 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 hCG_1642624A0A1W2PR95 340 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 NPHP1O15259 732 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 FANCGO15287 622 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 ZSCAN12O43309 604 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 PRDM1O75626 825 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 PLEKHA8P1O95397 391 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 PLCD1P51178 756 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 IFIT1BQ5T764 474 aaKnown RBP15.2■□□□□ 0.02
CSTF2-203ENST00000415585 SPECC1LQ69YQ0 1117 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 ANKRD18AQ8IVF6 992 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 BRIP1Q9BX63 1249 aa15.2■□□□□ 0.02
CSTF2-203ENST00000415585 A0A087X0B3 334 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 UBE4AQ14139 1066 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 C3orf67Q6ZVT6 689 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 CATIPQ7Z7H3 387 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 TC2NQ8N9U0 490 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 DHX58Q96C10 678 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 BAG1Q99933 345 aaPredicted RBP15.19■□□□□ 0.02
CSTF2-203ENST00000415585 SAMSN1Q9NSI8 373 aaKnown RBP15.19■□□□□ 0.02
CSTF2-203ENST00000415585 PPP2R2CQ9Y2T4 447 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 V9GY48 417 aaPredicted RBP15.19■□□□□ 0.02
CSTF2-203ENST00000415585 MYH13Q9UKX3 1938 aa15.19■□□□□ 0.02
CSTF2-203ENST00000415585 VWA3AA6NCI4 1184 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 FGRP09769 529 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 ERCC5P28715 1186 aaPredicted RBP15.18■□□□□ 0.02
CSTF2-203ENST00000415585 MEX3CQ5U5Q3 659 aaKnown RBP15.18■□□□□ 0.02
CSTF2-203ENST00000415585 ZNF384Q8TF68 577 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 RBM28Q9NW13 759 aaKnown RBP15.18■□□□□ 0.02
CSTF2-203ENST00000415585 ZNF652Q9Y2D9 606 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 COL5A3P25940 1745 aaPredicted RBP15.18■□□□□ 0.02
CSTF2-203ENST00000415585 AFF2P51816 1311 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 WNT7AO00755 349 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 STX10O60499 249 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 H2AFXP16104 143 aaPredicted RBP15.18■□□□□ 0.02
CSTF2-203ENST00000415585 ADKP55263 362 aaKnown RBP15.18■□□□□ 0.02
CSTF2-203ENST00000415585 TROAPQ12815 778 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 ERFEQ4G0M1 354 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 CAVIN4Q5BKX8 364 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 IQCA1Q86XH1 822 aa15.18■□□□□ 0.02
CSTF2-203ENST00000415585 BSDC1Q9NW68 430 aaPredicted RBP15.18■□□□□ 0.02
CSTF2-203ENST00000415585 NR1I3Q14994 352 aa15.17■□□□□ 0.02
CSTF2-203ENST00000415585 SF3B3Q15393 1217 aaKnown RBP15.17■□□□□ 0.02
CSTF2-203ENST00000415585 CTR9Q6PD62 1173 aa15.17■□□□□ 0.02
CSTF2-203ENST00000415585 SH3RF1Q7Z6J0 888 aa15.17■□□□□ 0.02
CSTF2-203ENST00000415585 SYMPKQ92797 1274 aaKnown RBP15.17■□□□□ 0.02
CSTF2-203ENST00000415585 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
CSTF2-203ENST00000415585 FAM53CQ9NYF3 392 aa15.17■□□□□ 0.02
CSTF2-203ENST00000415585 LAMB1P07942 1786 aa15.17■□□□□ 0.02
CSTF2-203ENST00000415585 A0A1B0GTH6 734 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 SLFN14P0C7P3 912 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 CALM1P0DP23 149 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 CALM2P0DP24 149 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 CALM3P0DP25 149 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 PCP11498 1178 aaKnown RBP15.16■□□□□ 0.02
CSTF2-203ENST00000415585 AFMP43652 599 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 NPY5RQ15761 445 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 FERMT2Q96AC1 680 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 PAGE5Q96GU1 130 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 CCDC34Q96HJ3 373 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 ZNF446Q9NWS9 450 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 MINPP1Q9UNW1 487 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 DDAH1O94760 285 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 BMP15O95972 392 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 NOM1Q5C9Z4 860 aaKnown RBP15.16■□□□□ 0.02
CSTF2-203ENST00000415585 CT47A1Q5JQC4 288 aaPredicted RBP15.16■□□□□ 0.02
CSTF2-203ENST00000415585 CLEC4GQ6UXB4 293 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 TMTC3Q6ZXV5 915 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 KRT222Q8N1A0 295 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 GJD4Q96KN9 370 aaPredicted RBP15.16■□□□□ 0.02
CSTF2-203ENST00000415585 SRRTQ9BXP5 876 aaKnown RBP15.16■□□□□ 0.02
CSTF2-203ENST00000415585 BRMS1Q9HCU9 246 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 PARP3Q9Y6F1 533 aa15.16■□□□□ 0.02
CSTF2-203ENST00000415585 BAZ2BQ9UIF8 2168 aaKnown RBP15.16■□□□□ 0.02
CSTF2-203ENST00000415585 CNTNAP5Q8WYK1 1306 aa15.15■□□□□ 0.02
CSTF2-203ENST00000415585 GOLGA6L9A6NEM1 432 aa15.15■□□□□ 0.02
CSTF2-203ENST00000415585 USP17L12C9JPN9 530 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms