RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 NID2Q14112 1375 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 PLIN4Q96Q06 1357 aa16.62■□□□□ 0.25
HMGA1P1-201ENST00000415560 AKR1B1P15121 316 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 SYT1P21579 422 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 GNAQP50148 359 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 AKAP17AQ02040 695 aaKnown RBP16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 RASA3Q14644 834 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 PNMA1Q8ND90 353 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 RGS22Q8NE09 1264 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 DDX11Q96FC9 970 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 GBP4Q96PP9 640 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 TMEM47Q9BQJ4 181 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 MYL10Q9BUA6 226 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 KANSL2Q9H9L4 492 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 ATP6V1DQ9Y5K8 247 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 CNTNAP1P78357 1384 aa16.61■□□□□ 0.25
HMGA1P1-201ENST00000415560 H3BQV1 296 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 CTDNEP1O95476 244 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 BRD1O95696 1058 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 TTLL1O95922 423 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 IFNAR1P17181 557 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 RXRAP19793 462 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 EPS15P42566 896 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 TROAPQ12815 778 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 ABCB5Q2M3G0 1257 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 IFFO2Q5TF58 517 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 TMEM179Q6ZVK1 233 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 CEP95Q96GE4 821 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 TMEM39BQ9GZU3 492 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 ORC3Q9UBD5 711 aaPredicted RBP16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 PPP2R3BQ9Y5P8 575 aa16.6■□□□□ 0.25
HMGA1P1-201ENST00000415560 SIPA1L1O43166 1804 aa16.59■□□□□ 0.25
HMGA1P1-201ENST00000415560 IGKV6D-41A0A0C4DH26 115 aa16.59■□□□□ 0.25
HMGA1P1-201ENST00000415560 JAK2O60674 1132 aa16.59■□□□□ 0.25
HMGA1P1-201ENST00000415560 CDC27P30260 824 aa16.59■□□□□ 0.25
HMGA1P1-201ENST00000415560 NOVP48745 357 aa16.59■□□□□ 0.25
HMGA1P1-201ENST00000415560 LZTS2Q9BRK4 669 aa16.59■□□□□ 0.25
HMGA1P1-201ENST00000415560 CLIP2Q9UDT6 1046 aa16.59■□□□□ 0.25
HMGA1P1-201ENST00000415560 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 EGFRP00533 1210 aa16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 ZSCAN22P10073 491 aaPredicted RBP16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 ANGEL2Q5VTE6 544 aaKnown RBP16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 DCAF15Q66K64 600 aa16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 TNPO1Q92973 898 aaKnown RBP16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 DEFB129Q9H1M3 183 aa16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 DNAJC18Q9H819 358 aa16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 NYAP2Q9P242 653 aa16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 STK36Q9NRP7 1315 aa16.58■□□□□ 0.24
HMGA1P1-201ENST00000415560 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 FAM196BA6NMK8 535 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 GOLGA6L22H0YM25 854 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 FMNL1O95466 1100 aaPredicted RBP16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 TRIM29Q14134 588 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 GRM4Q14833 912 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 NTRK3Q16288 839 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 USP50Q70EL3 339 aaPredicted RBP16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 DCPSQ96C86 337 aaKnown RBP16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 SLC26A6Q9BXS9 759 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 RNF26Q9BY78 433 aaPredicted RBP16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 GINM1Q9NU53 330 aa16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 RBM27Q9P2N5 1060 aaKnown RBP16.57■□□□□ 0.24
HMGA1P1-201ENST00000415560 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 DEXIO95424 95 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 PARP1P09874 1014 aaKnown RBP16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 XBP1P17861 261 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 PTMSP20962 102 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 TRPM4Q8TD43 1214 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 MKL1Q969V6 931 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
HMGA1P1-201ENST00000415560 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 GDF11O95390 407 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 F13A1P00488 732 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 FDPSP14324 419 aaKnown RBP16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 PKP1Q13835 747 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 MIGA2Q7L4E1 593 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 ARHGEF10LQ9HCE6 1279 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 SYNPO2Q9UMS6 1093 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 MTMR6Q9Y217 621 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 ZDHHC9Q9Y397 364 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 MYH6P13533 1939 aa16.55■□□□□ 0.24
HMGA1P1-201ENST00000415560 GREB1LQ9C091 1923 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms