RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
LINC00330-201ENST00000414562 CCDC69A6NI79 296 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 SHMT1P34896 483 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 CDK8P49336 464 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 EAPPQ56P03 285 aaPredicted RBP13.17□□□□□ -0.3
LINC00330-201ENST00000414562 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 USP50Q70EL3 339 aaPredicted RBP13.17□□□□□ -0.3
LINC00330-201ENST00000414562 MIGA2Q7L4E1 593 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 METTL16Q86W50 562 aaKnown RBP13.17□□□□□ -0.3
LINC00330-201ENST00000414562 AMOTL1Q8IY63 956 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 SMARCC2Q8TAQ2 1214 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 IGDCC4Q8TDY8 1250 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 GZF1Q9H116 711 aaPredicted RBP13.17□□□□□ -0.3
LINC00330-201ENST00000414562 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
LINC00330-201ENST00000414562 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 RASA1P20936 1047 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 WTAPQ15007 396 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 C16orf86Q6ZW13 317 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC00330-201ENST00000414562 GLIS2Q9BZE0 524 aaPredicted RBP13.17□□□□□ -0.3
LINC00330-201ENST00000414562 LY9Q9HBG7 655 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 LMBRD1Q9NUN5 540 aa13.17□□□□□ -0.3
LINC00330-201ENST00000414562 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
LINC00330-201ENST00000414562 ZBTB43O43298 467 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 MYO1BO43795 1136 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
LINC00330-201ENST00000414562 NMT2O60551 498 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 CTDNEP1O95476 244 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
LINC00330-201ENST00000414562 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
LINC00330-201ENST00000414562 LIFRP42702 1097 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00330-201ENST00000414562 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 USP48Q86UV5 1035 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 ZSCAN29Q8IWY8 852 aaPredicted RBP13.16□□□□□ -0.3
LINC00330-201ENST00000414562 CSRNP1Q96S65 589 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 ZKSCAN3Q9BRR0 538 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
LINC00330-201ENST00000414562 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
LINC00330-201ENST00000414562 MYH8P13535 1937 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 PPFIA3O75145 1194 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
LINC00330-201ENST00000414562 FOSBP53539 338 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.3
LINC00330-201ENST00000414562 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
LINC00330-201ENST00000414562 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 MICU3Q86XE3 530 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 MTA3Q9BTC8 594 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 GOLGA8AA7E2F4 631 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 TRAF5O00463 557 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 MAP3K10Q02779 954 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 PDE4BQ07343 736 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 SGMS1Q86VZ5 419 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 PI4KBQ9UBF8 816 aa13.15□□□□□ -0.3
LINC00330-201ENST00000414562 IQCA1LA6NCM1 817 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 ORC4O43929 436 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 CDKL5O76039 1030 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 AKR1B1P15121 316 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 IQCA1Q86XH1 822 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 EHD4Q9H223 541 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 SERPINB13Q9UIV8 391 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 GREB1LQ9C091 1923 aaPredicted RBP13.14□□□□□ -0.31
LINC00330-201ENST00000414562 PITPNM2Q9BZ72 1349 aa13.14□□□□□ -0.31
LINC00330-201ENST00000414562 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 RXRAP19793 462 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 APOBEC3FQ8IUX4 373 aaKnown RBP13.13□□□□□ -0.31
LINC00330-201ENST00000414562 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 DHX36Q9H2U1 1008 aaKnown RBP13.13□□□□□ -0.31
LINC00330-201ENST00000414562 ORC3Q9UBD5 711 aaPredicted RBP13.13□□□□□ -0.31
LINC00330-201ENST00000414562 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 GUCY1A2P33402 732 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 TMEM132AQ24JP5 1023 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 KLHL40Q2TBA0 621 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 TATDN1Q6P1N9 297 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 MOB2Q70IA6 237 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
LINC00330-201ENST00000414562 ZC3H15Q8WU90 426 aaKnown RBP13.13□□□□□ -0.31
LINC00330-201ENST00000414562 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
LINC00330-201ENST00000414562 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 GDPD2Q9HCC8 539 aa13.13□□□□□ -0.31
LINC00330-201ENST00000414562 TNKSO95271 1327 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 KIF3CO14782 793 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 ADD1P35611 737 aaKnown RBP13.12□□□□□ -0.31
LINC00330-201ENST00000414562 DNM1Q05193 864 aaKnown RBP13.12□□□□□ -0.31
LINC00330-201ENST00000414562 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 CCDC84Q86UT8 332 aaPredicted RBP13.12□□□□□ -0.31
LINC00330-201ENST00000414562 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
LINC00330-201ENST00000414562 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms