RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 DDTLA6NHG4 134 aaPredicted RBP11.93□□□□□ -0.5
TRIM27-203ENST00000414543 DEXIO95424 95 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
TRIM27-203ENST00000414543 USP48Q86UV5 1035 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 FOXP4Q8IVH2 680 aaPredicted RBP11.93□□□□□ -0.5
TRIM27-203ENST00000414543 MTMR14Q8NCE2 650 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 MAP3K14Q99558 947 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 RNF26Q9BY78 433 aaPredicted RBP11.93□□□□□ -0.5
TRIM27-203ENST00000414543 FHDC1Q9C0D6 1143 aaPredicted RBP11.93□□□□□ -0.5
TRIM27-203ENST00000414543 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 MYO1BO43795 1136 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 FAM173BQ6P4H8 233 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 NBPF11Q86T75 865 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 CMTR1Q8N1G2 835 aaKnown RBP11.93□□□□□ -0.5
TRIM27-203ENST00000414543 CCDC17Q96LX7 622 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 TMEM47Q9BQJ4 181 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 GDPD2Q9HCC8 539 aa11.93□□□□□ -0.5
TRIM27-203ENST00000414543 ZNF70Q9UC06 446 aaPredicted RBP11.93□□□□□ -0.5
TRIM27-203ENST00000414543 MYH8P13535 1937 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 PLIN4Q96Q06 1357 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 TCP10L2B9ZVM9 353 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 FIBPO43427 364 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 TOP1P11387 765 aaKnown RBP11.92□□□□□ -0.5
TRIM27-203ENST00000414543 SHMT1P34896 483 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 KLHL40Q2TBA0 621 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 TMTC3Q6ZXV5 915 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 TMEM87AQ8NBN3 555 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 CEP95Q96GE4 821 aa11.92□□□□□ -0.5
TRIM27-203ENST00000414543 ATRNL1Q5VV63 1379 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 FZD9O00144 591 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 MPHOSPH10O00566 681 aaKnown RBP11.91□□□□□ -0.5
TRIM27-203ENST00000414543 PRPF3O43395 683 aaKnown RBP11.91□□□□□ -0.5
TRIM27-203ENST00000414543 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 AKR1B1P15121 316 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 GNAQP50148 359 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 GNL2Q13823 731 aaKnown RBP11.91□□□□□ -0.5
TRIM27-203ENST00000414543 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 PPP4R3BQ5MIZ7 849 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 KRT40Q6A162 431 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-203ENST00000414543 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-203ENST00000414543 VEZTQ9HBM0 779 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 MYOZ2Q9NPC6 264 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 TFIP11Q9UBB9 837 aaKnown RBP11.91□□□□□ -0.5
TRIM27-203ENST00000414543 CFAP45Q9UL16 551 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 GJA3Q9Y6H8 435 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 TCHHQ07283 1943 aa11.91□□□□□ -0.5
TRIM27-203ENST00000414543 COL2A1P02458 1487 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-203ENST00000414543 MBD3O95983 291 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 XBP1P17861 261 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 GRM4Q14833 912 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 CERKLQ49MI3 558 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-203ENST00000414543 FKBP1CQ5VVH2 108 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 ATL3Q6DD88 541 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 BRAPQ7Z569 592 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 FAM151AQ8WW52 585 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 CSRNP1Q96S65 589 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 GJB4Q9NTQ9 266 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 MTMR4Q9NYA4 1195 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 MTMR7Q9Y216 660 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 GUCY1A2P33402 732 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 NOVP48745 357 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 PRELPP51888 382 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 FUT2Q10981 343 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 SAFBQ15424 915 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRIM27-203ENST00000414543 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
TRIM27-203ENST00000414543 DPF2Q92785 391 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 SPATA32Q96LK8 384 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRIM27-203ENST00000414543 GZF1Q9H116 711 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-203ENST00000414543 DNAJC18Q9H819 358 aa11.9□□□□□ -0.5
TRIM27-203ENST00000414543 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.5
TRIM27-203ENST00000414543 V9GY48 417 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-203ENST00000414543 IGKV6D-41A0A0C4DH26 115 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 FAM196BA6NMK8 535 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 WNT10BO00744 389 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 TTLL1O95922 423 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 LMNB1P20700 586 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 GMPSP49915 693 aaPredicted RBP11.89□□□□□ -0.51
TRIM27-203ENST00000414543 ZNF280AP59817 542 aaPredicted RBP11.89□□□□□ -0.51
TRIM27-203ENST00000414543 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
TRIM27-203ENST00000414543 GSE1Q14687 1217 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
TRIM27-203ENST00000414543 TATDN1Q6P1N9 297 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 METTL16Q86W50 562 aaKnown RBP11.89□□□□□ -0.51
TRIM27-203ENST00000414543 ZBED3Q96IU2 234 aaPredicted RBP11.89□□□□□ -0.51
TRIM27-203ENST00000414543 LZTS2Q9BRK4 669 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 CLIP2Q9UDT6 1046 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
TRIM27-203ENST00000414543 CNTNAP5Q8WYK1 1306 aa11.89□□□□□ -0.51
TRIM27-203ENST00000414543 UBE2Q2LH0YL09 131 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
TRIM27-203ENST00000414543 PARP1P09874 1014 aaKnown RBP11.88□□□□□ -0.51
TRIM27-203ENST00000414543 TNNI2P48788 182 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 UBE2HP62256 183 aa11.88□□□□□ -0.51
TRIM27-203ENST00000414543 NBPF9Q3BBW0 867 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms